RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TPH2Q8IWU9 490 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 CCDC89Q8N998 374 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 DBF4BQ8NFT6 615 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 KLHL29Q96CT2 875 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 TTC25Q96NG3 672 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 FIZ1Q96SL8 496 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 AGO3Q9H9G7 860 aaKnown RBP13.57□□□□□ -0.24
HMGB2-205ENST00000511316 NRBP2Q9NSY0 501 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 CTNNAL1Q9UBT7 734 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-205ENST00000511316 C15orf41Q9Y2V0 281 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 TANC1Q9C0D5 1861 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 REV3LO60673 3130 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 ZC3H11AO75152 810 aaKnown RBP eCLIP13.57□□□□□ -0.24
HMGB2-205ENST00000511316 GPR32O75388 356 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 LYPLA2O95372 231 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 PARNO95453 639 aaKnown RBP13.57□□□□□ -0.24
HMGB2-205ENST00000511316 MXI1P50539 228 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 ZNF211Q13398 564 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-205ENST00000511316 ARHGAP44Q17R89 818 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 PARP6Q2NL67 630 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-205ENST00000511316 EXOC3L1Q86VI1 746 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 LXNQ9BS40 222 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 ARHGEF3Q9NR81 526 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 EVPLQ92817 2033 aa13.57□□□□□ -0.24
HMGB2-205ENST00000511316 SIP14410 1827 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 TMEM120BA0PK00 339 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 ABLIM1O14639 778 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CLGNO14967 610 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CLTAP09496 248 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CCNB1P14635 433 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 ALDH3A1P30838 453 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 BPIFB4P59827 614 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 IFI35P80217 286 aaPredicted RBP13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CDR2Q01850 454 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 TMEM62Q0P6H9 643 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 LPIN1Q14693 890 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 MESDQ14696 234 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 FBXO47Q5MNV8 452 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 NME8Q8N427 588 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 TEX9Q8N6V9 391 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 TMEM40Q8WWA1 233 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 TCP11Q8WWU5 503 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 SHC3Q92529 594 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 FAM167AQ96KS9 214 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 FAM49AQ9H0Q0 323 aaPredicted RBP13.56□□□□□ -0.24
HMGB2-205ENST00000511316 CDC42EP4Q9H3Q1 356 aaKnown RBP13.56□□□□□ -0.24
HMGB2-205ENST00000511316 ECT2Q9H8V3 914 aa13.56□□□□□ -0.24
HMGB2-205ENST00000511316 THAP12O43422 761 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 ATP2C2O75185 946 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 DCTN3O75935 186 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 ATF2P15336 505 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 SCP2P22307 547 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 STX2P32856 288 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 CLCN3P51790 818 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 NCALDP61601 193 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 RASA2Q15283 850 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 PTPROQ16827 1216 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 CMPK2Q5EBM0 449 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 PLA2G4FQ68DD2 849 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 EFCAB12Q6NXP0 572 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 RHBDF2Q6PJF5 856 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 RTN4RL1Q86UN2 441 aaPredicted RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 AGGF1Q8N302 714 aaeCLIP13.55□□□□□ -0.244e-33■■■■■ 29.8
HMGB2-205ENST00000511316 EPS8L3Q8TE67 593 aaKnown RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 EPS8L1Q8TE68 723 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 NUP85Q9BW27 656 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 ADAMTS10Q9H324 1103 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 ASIC3Q9UHC3 531 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 NOCTQ9UK39 431 aaKnown RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 SMG5Q9UPR3 1016 aaKnown RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 CDY2AQ9Y6F7 541 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 K7ENM7 598 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 MAGEB2O15479 319 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 RARAP10276 462 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 FGFR4P22455 802 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 PBX2P40425 430 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 MRPS6P82932 125 aaKnown RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 RNASELQ05823 741 aaKnown RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 SPRED3Q2MJR0 410 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 NUGGCQ68CJ6 796 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TTC27Q6P3X3 843 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TBC1D1Q86TI0 1168 aaPredicted RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 CRIPAKQ8N1N5 446 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms