RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GAREM2Q75VX8 874 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 FILIP1Q7Z7B0 1213 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 GPIHBP1Q8IV16 184 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 SLC44A3Q8N4M1 653 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 LEMD2Q8NC56 503 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 B3GALNT2Q8NCR0 500 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 MYCBPAPQ8TBZ2 947 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 PCED1BQ96HM7 432 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 LRFN3Q9BTN0 628 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 IMPG2Q9BZV3 1241 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 MAGED2Q9UNF1 606 aaPredicted RBP14.91□□□□□ -0.02
DDX41-212ENST00000511040 ASB3Q9Y575 518 aa14.91□□□□□ -0.02
DDX41-212ENST00000511040 TECTAO75443 2155 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 GOLGA6L22H0YM25 854 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 GPR37L1O60883 481 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 CD58P19256 250 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 GABRR2P28476 465 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 RPL10AP62906 217 aaKnown RBP14.9□□□□□ -0.02
DDX41-212ENST00000511040 SIGLEC14Q08ET2 396 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 FAM78AQ5JUQ0 283 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 FRMD5Q7Z6J6 570 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 ACOT1Q86TX2 421 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 UBALD2Q8IYN6 164 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 CCDC150Q8NCX0 1101 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 SLC35C1Q96A29 364 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 SRRTQ9BXP5 876 aaKnown RBP14.9□□□□□ -0.02
DDX41-212ENST00000511040 B3GNT5Q9BYG0 378 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 ZNF518BQ9C0D4 1074 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 NIF3L1Q9GZT8 377 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 ATXN3LQ9H3M9 355 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 SLITRK6Q9H5Y7 841 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 IL21Q9HBE4 155 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 GDE1Q9NZC3 331 aa14.9□□□□□ -0.02
DDX41-212ENST00000511040 SLC38A8A6NNN8 435 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 MICAL2O94851 1124 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 PDGFBP01127 241 aaPredicted RBP14.89□□□□□ -0.03
DDX41-212ENST00000511040 HMGA1P17096 107 aaKnown RBP14.89□□□□□ -0.03
DDX41-212ENST00000511040 GRIK1P39086 918 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 NDST1P52848 882 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 CACNA2D1P54289 1103 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 CYP4F8P98187 520 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 MAPRE1Q15691 268 aaKnown RBP14.89□□□□□ -0.03
DDX41-212ENST00000511040 DPCR1Q3MIW9 517 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 CFAP221Q4G0U5 840 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 TANGO2Q6ICL3 276 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 HFE2Q6ZVN8 426 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 MTSS1LQ765P7 747 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 CREBRFQ8IUR6 639 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 FBXL13Q8NEE6 735 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 TATDN2Q93075 761 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 ASIC4Q96FT7 647 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX41-212ENST00000511040 MED15Q96RN5 788 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 MED10Q9BTT4 135 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 BCO2Q9BYV7 579 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 PLA2G2FQ9BZM2 168 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 METTL14Q9HCE5 456 aaKnown RBP14.89□□□□□ -0.03
DDX41-212ENST00000511040 RAB20Q9NX57 234 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 RWDD2AQ9UIY3 292 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 DUSP12Q9UNI6 340 aa14.89□□□□□ -0.03
DDX41-212ENST00000511040 CFHP08603 1231 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 CCDC130P13994 396 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 FCARP24071 287 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 VIPR2P41587 438 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 MAGEA11P43364 429 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 LRMPQ12912 555 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 WDR44Q5JSH3 913 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 GPR158Q5T848 1215 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 FOXR2Q6PJQ5 311 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 MLKLQ8NB16 471 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
DDX41-212ENST00000511040 NXPE3Q969Y0 559 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 TWNKQ96RR1 684 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 ARID3AQ99856 593 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 FAM49BQ9NUQ9 324 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 TMEM30AQ9NV96 361 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 FBXL21Q9UKT6 434 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 TRIOO75962 3097 aa14.88□□□□□ -0.03
DDX41-212ENST00000511040 PRR33A8MZF0 331 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 F8VP50 259 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 NOL4O94818 638 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 CSH1P0DML2 217 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 CSH2P0DML3 217 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 SRFP11831 508 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 ANXA13P27216 316 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 FMO5P49326 533 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 NLRP12P59046 1061 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 GPC5P78333 572 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 GRM2Q14416 872 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 VSTM1Q6UX27 236 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 TMEM150AQ86TG1 271 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 C12orf29Q8N999 325 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 SMARCD2Q92925 531 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 PBXIP1Q96AQ6 731 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 TNIP3Q96KP6 325 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 ASB16Q96NS5 453 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 GCNAQ96QF7 691 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 ELOVL4Q9GZR5 314 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 CYP3A43Q9HB55 503 aa14.87□□□□□ -0.03
DDX41-212ENST00000511040 RAPGEFL1Q9UHV5 662 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms