RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 LMBRD2Q68DH5 695 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-205ENST00000505998 SP5Q6BEB4 398 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-205ENST00000505998 KSR2Q6VAB6 950 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 GPR149Q86SP6 731 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 ADGRG5Q8IZF4 528 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 LCORLQ8N3X6 602 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 ASB10Q8WXI3 467 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 FUBP1Q96AE4 644 aaKnown RBP6.98□□□□□ -1.29
NIPBL-205ENST00000505998 APIPQ96GX9 242 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 SARGQ9BW04 601 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 KIAA1586Q9HCI6 787 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 HESX1Q9UBX0 185 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 FAM50BQ9Y247 325 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 TMX2Q9Y320 296 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 SIGLEC1Q9BZZ2 1709 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 DENND4BO75064 1496 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-205ENST00000505998 PIPSLA2A3N6 862 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 TBX3O15119 743 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 SOAT2O75908 522 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 MAP4K4O95819 1239 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-205ENST00000505998 MYF5P13349 255 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 ITGALP20701 1170 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 ZEB1P37275 1124 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-205ENST00000505998 UCP3P55916 312 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 SLC13A2Q13183 592 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 HLXQ14774 488 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-205ENST00000505998 ABHD17BQ5VST6 288 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 MICALCLQ6ZW33 695 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 TMPRSS9Q7Z410 1059 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 NEU4Q8WWR8 484 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-205ENST00000505998 PTCD3Q96EY7 689 aaKnown RBP6.97□□□□□ -1.29
NIPBL-205ENST00000505998 SLC46A1Q96NT5 459 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 MOGAT1Q96PD6 335 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 HEPHQ9BQS7 1158 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 SPATA5L1Q9BVQ7 753 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 DPH1Q9BZG8 443 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 TTYH3Q9C0H2 523 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 NUP62CLQ9H1M0 184 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 SMOC2Q9H3U7 446 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 INTS13Q9NVM9 706 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 XPR1Q9UBH6 696 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 CPNE7Q9UBL6 633 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 OGDHLQ9ULD0 1010 aa6.97□□□□□ -1.29
NIPBL-205ENST00000505998 RNF17Q9BXT8 1623 aaKnown RBP6.97□□□□□ -1.29
NIPBL-205ENST00000505998 AGLP35573 1532 aa6.96□□□□□ -1.29
NIPBL-205ENST00000505998 FAM135AQ9P2D6 1515 aa6.96□□□□□ -1.29
NIPBL-205ENST00000505998 ABCC5O15440 1437 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 DAPK1P53355 1430 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 TRAPPC8Q9Y2L5 1435 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 F5H697 171 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 PQBP1O60828 265 aaKnown RBP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 EGR2P11161 476 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 TRIM27P14373 513 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 GDF5P43026 501 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 NPTX2P47972 431 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 GCLCP48506 637 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SLC11A2P49281 568 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 NDUFV1P49821 464 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 TOB1P50616 345 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 PURAQ00577 322 aaKnown RBP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 CTBP1Q13363 440 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 RAB32Q13637 225 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SAFBQ15424 915 aaKnown RBP eCLIP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 CNGA2Q16280 664 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 LONRF3Q496Y0 759 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SLC44A4Q53GD3 710 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 LAYNQ6UX15 382 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SLC15A4Q8N697 577 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 DNAJC5GQ8N7S2 189 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 FBXO41Q8TF61 875 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 LARP4BQ92615 738 aaKnown RBP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 CYP4F11Q9HBI6 524 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 ZNF287Q9HBT7 754 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 CASS4Q9NQ75 786 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SACM1LQ9NTJ5 587 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SPATA31A3Q5VYP0 1347 aa6.96□□□□□ -1.3
NIPBL-205ENST00000505998 SCAPERQ9BY12 1400 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 ZKSCAN1P17029 563 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-205ENST00000505998 VIPR2P41587 438 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 BLOC1S1P78537 153 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 SCAPQ12770 1279 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 BOP1Q14137 746 aaKnown RBP6.95□□□□□ -1.3
NIPBL-205ENST00000505998 IQCB1Q15051 598 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 CCSAPQ6IQ19 270 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-205ENST00000505998 MPP5Q8N3R9 675 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 APOL5Q9BWW9 433 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 SMURF2Q9HAU4 748 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-205ENST00000505998 PAXBP1Q9Y5B6 917 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 UNC13BO14795 1591 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 ROCK1Q13464 1354 aa6.95□□□□□ -1.3
NIPBL-205ENST00000505998 MROH1Q8NDA8 1641 aa6.94□□□□□ -1.3
NIPBL-205ENST00000505998 PTPRKQ15262 1439 aa6.94□□□□□ -1.3
NIPBL-205ENST00000505998 A0A087WWL8 130 aa6.94□□□□□ -1.3
NIPBL-205ENST00000505998 A0A0B4J269 797 aa6.94□□□□□ -1.3
NIPBL-205ENST00000505998 TRIAP1O43715 76 aa6.94□□□□□ -1.3
NIPBL-205ENST00000505998 FSHBP01225 129 aa6.94□□□□□ -1.3
NIPBL-205ENST00000505998 MYL1P05976 194 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms