RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 SKIV2L2P42285 1042 aaKnown RBP17.84■□□□□ 0.45
LIN54-204ENST00000505397 IL9RQ01113 521 aa17.84■□□□□ 0.45
LIN54-204ENST00000505397 OASLQ15646 514 aaKnown RBP17.84■□□□□ 0.45
LIN54-204ENST00000505397 ZKSCAN8Q15776 578 aaPredicted RBP17.84■□□□□ 0.45
LIN54-204ENST00000505397 TLDC1Q6P9B6 456 aa17.84■□□□□ 0.45
LIN54-204ENST00000505397 RGS9BPQ6ZS82 235 aa17.84■□□□□ 0.45
LIN54-204ENST00000505397 EBF2Q9HAK2 575 aa17.84■□□□□ 0.45
LIN54-204ENST00000505397 SAYSD1Q9NPB0 183 aa17.84■□□□□ 0.45
LIN54-204ENST00000505397 PI4K2BG5E9Z4 385 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 IGF2BP3O00425 579 aaKnown RBP eCLIP17.83■□□□□ 0.45
LIN54-204ENST00000505397 SNAI1O95863 264 aaPredicted RBP17.83■□□□□ 0.45
LIN54-204ENST00000505397 MORF4L2Q15014 288 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 RASA2Q15283 850 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 E2F5Q15329 346 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 TMED2Q15363 201 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 MAPK6Q16659 721 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 PPP1R15BQ5SWA1 713 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 SCARA3Q6AZY7 606 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 CYP4F22Q6NT55 531 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 ZPBP2Q6X784 338 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 TINF2Q9BSI4 451 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 ABHD16BQ9H3Z7 469 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 KLHL11Q9NVR0 708 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 KLHL14Q9P2G3 628 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 CPA4Q9UI42 421 aa17.83■□□□□ 0.45
LIN54-204ENST00000505397 ZNF236Q9UL36 1845 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 EXOC1LA0A1B0GW35 172 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 SLC15A5A6NIM6 579 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 ZSCAN5DPP0CG00 497 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 HARSP12081 509 aaKnown RBP17.83■□□□□ 0.44
LIN54-204ENST00000505397 PECAM1P16284 738 aaPredicted RBP17.83■□□□□ 0.44
LIN54-204ENST00000505397 SSR1P43307 286 aaKnown RBP17.83■□□□□ 0.44
LIN54-204ENST00000505397 IGBP1P78318 339 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 NCOA4Q13772 614 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 CDCA2Q69YH5 1023 aaPredicted RBP17.83■□□□□ 0.44
LIN54-204ENST00000505397 EFCAB12Q6NXP0 572 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 SPOCD1Q6ZMY3 1216 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 ECHDC2Q86YB7 292 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 RASAL3Q86YV0 1011 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 AFG1LQ8WV93 481 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 EMID1Q96A84 441 aaPredicted RBP17.83■□□□□ 0.44
LIN54-204ENST00000505397 CXorf56Q9H5V9 222 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 STARD13Q9Y3M8 1113 aa17.83■□□□□ 0.44
LIN54-204ENST00000505397 MANSC4A6NHS7 340 aaPredicted RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 ALOX15BO15296 676 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 LSM8O95777 96 aaKnown RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 ITGBL1O95965 494 aaPredicted RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 PRKCBP05771 671 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 CALB1P05937 261 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 ARSEP51690 589 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 OGDHQ02218 1023 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 WDR72Q3MJ13 1102 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 ZNF484Q5JVG2 852 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 RNASEH2BQ5TBB1 312 aaKnown RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 KLHL29Q96CT2 875 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 NLRP4Q96MN2 994 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 KATNBL1Q9H079 304 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 ZNF148Q9UQR1 794 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 hCG_1818297A0A087WSY0 165 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 ASS1P00966 412 aaKnown RBP17.82■□□□□ 0.44
LIN54-204ENST00000505397 KRT1P04264 644 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 KAZNQ674X7 775 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 PITPNM3Q9BZ71 974 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 RNPEPQ9H4A4 650 aa17.82■□□□□ 0.44
LIN54-204ENST00000505397 F8VP50 259 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 ECM2O94769 699 aaPredicted RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 ITGAVP06756 1048 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 ETS1P14921 441 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 VCPP55072 806 aaKnown RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 ADCY1Q08828 1119 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 FASTKD3Q14CZ7 662 aaKnown RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 NIPA2Q8N8Q9 360 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 KAT6AQ92794 2004 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 FAM189A1O60320 539 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 MSCO60682 206 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 TOM1L1O75674 476 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 CST3P01034 146 aaPredicted RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 KRT16P08779 473 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 ZNF286BP0CG31 522 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 CDH5P33151 784 aaPredicted RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 CDKN2BP42772 138 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 CLCN3P51790 818 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 GRM1Q13255 1194 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 TMEM132AQ24JP5 1023 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 TXNRD3NBQ6F5E7 133 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 PPCSQ9HAB8 311 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 SENP1Q9P0U3 644 aa17.81■□□□□ 0.44
LIN54-204ENST00000505397 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.81■□□□□ 0.44
LIN54-204ENST00000505397 INSRRP14616 1297 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 ATF7P17544 494 aaPredicted RBP17.8■□□□□ 0.44
LIN54-204ENST00000505397 ELF1P32519 619 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 AP3M2P53677 418 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 GPS1Q13098 491 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms