RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 MTERF2Q49AM1 385 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 PDIK1LQ8N165 341 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 REPS2Q8NFH8 660 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 DCAKDQ8WVC6 231 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 TRIM55Q9BYV6 548 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 LHX5Q9H2C1 402 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 RPAP3Q9H6T3 665 aaPredicted RBP15.72■□□□□ 0.11
SNF8-203ENST00000504000 MANSC1Q9H8J5 431 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 FBXO40Q9UH90 709 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 MTO1Q9Y2Z2 717 aaKnown RBP15.72■□□□□ 0.11
SNF8-203ENST00000504000 PARP14Q460N5 1801 aa15.72■□□□□ 0.11
SNF8-203ENST00000504000 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 WNT10BO00744 389 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 OATP04181 439 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ACADSP16219 412 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 EPHB2P29323 1055 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 RFC5P40937 340 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 SLC25A11Q02978 314 aaKnown RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 KRT72Q14CN4 511 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ACAP1Q15027 740 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 HADHQ16836 314 aaKnown RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 PLEKHG4Q58EX7 1191 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 WDR78Q5VTH9 848 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 TXNRD3NBQ6F5E7 133 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 CAPRIN2Q6IMN6 1127 aaKnown RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 WDTC1Q8N5D0 677 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ACTL9Q8TC94 416 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 TCP10LQ8TDR4 215 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 CYTH2Q99418 400 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 TARS2Q9BW92 718 aaKnown RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 NIF3L1Q9GZT8 377 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 MMADHCQ9H3L0 296 aaPredicted RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 ADAMTS5Q9UNA0 930 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 RIPK3Q9Y572 518 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 IQANK1A0A1B0GTG1 560 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 KLF11O14901 512 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 CBX6O95503 412 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 IFNB1P01574 187 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ADRA1DP25100 572 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 ICAM3P32942 547 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 RAD23BP54727 409 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 OTUD4Q01804 1114 aaKnown RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 SLC18A2Q05940 514 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 GPAT2Q6NUI2 795 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 C4orf50Q6ZRC1 276 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 MTDHQ86UE4 582 aaKnown RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 SLC7A3Q8WY07 619 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 TEPSINQ96N21 525 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 BTBD10Q9BSF8 475 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 DENND2DQ9H6A0 471 aaPredicted RBP15.71■□□□□ 0.11
SNF8-203ENST00000504000 WDR35Q9P2L0 1181 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 STOML1Q9UBI4 398 aa15.71■□□□□ 0.11
SNF8-203ENST00000504000 KIAA1217Q5T5P2 1943 aa15.71■□□□□ 0.1
SNF8-203ENST00000504000 IGKV6D-21A0A0A0MT36 114 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 FAM189A1O60320 539 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 ATP4AP20648 1035 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 KDELR1P24390 212 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 SSTR1P30872 391 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 STIP1P31948 543 aaKnown RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 RPL22P35268 128 aaKnown RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 YWHAEP62258 255 aaKnown RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 IRX1P78414 480 aaPredicted RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 MRPS35P82673 323 aaKnown RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 TNFAIP1Q13829 316 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 ZBTB41Q5SVQ8 909 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 FNBP1LQ5T0N5 605 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 CDCA2Q69YH5 1023 aaPredicted RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 ZNF449Q6P9G9 518 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 ANKMY2Q8IV38 441 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 PALM2Q8IXS6 379 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 LMNTD2Q8IXW0 634 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 KIRREL3Q8IZU9 778 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 FBXO36Q8NEA4 188 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 RSAD2Q8WXG1 361 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 APBB2Q92870 758 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 SPDL1Q96EA4 605 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 PTCD3Q96EY7 689 aaKnown RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 FRMD8Q9BZ67 464 aaPredicted RBP15.7■□□□□ 0.1
SNF8-203ENST00000504000 NPHS2Q9NP85 383 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 ZNF302Q9NR11 478 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 CISHQ9NSE2 258 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 KANSL3Q9P2N6 904 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 AGTPBP1Q9UPW5 1226 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 PPME1Q9Y570 386 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 FER1L6Q2WGJ9 1857 aa15.7■□□□□ 0.1
SNF8-203ENST00000504000 CCDC189A1A4V9 331 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 LRRIQ4A6NIV6 560 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 APOC4-APOC2K7ER74 178 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 ADCY3O60266 1144 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 LRCH4O75427 683 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 CST3P01034 146 aaPredicted RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 APOC2P02655 101 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 ABL2P42684 1182 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 ETV4P43268 484 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 EFNA5P52803 228 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 GRIK3Q13003 919 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 TSNAXIP1Q2TAA8 658 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 MSS51Q4VC12 460 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms