RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TCRBV5S1A1TA0A578 114 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 ARL5CA6NH57 179 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 KRIT1O00522 736 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 SPTLC1O15269 473 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 HEXIM1O94992 359 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 KRT1P04264 644 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 ERBB2P04626 1255 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CCDC130P13994 396 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 WARSP23381 471 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 SSR1P43307 286 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 BCAT1P54687 386 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 RWDD2BP57060 319 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 PSMC1P62191 440 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 ZNF252P-AS1Q0IIN9 211 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CNGA2Q16280 664 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 LONRF2Q1L5Z9 754 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 SOWAHAQ2M3V2 549 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 FAM102AQ5T9C2 384 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 WDR93Q6P2C0 686 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 LCLAT1Q6UWP7 414 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 AGMOQ6ZNB7 445 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 LRRC8DQ7L1W4 858 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 MRPL10Q7Z7H8 261 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 OSTM1Q86WC4 334 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 XYLT1Q86Y38 959 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 ECHDC2Q86YB7 292 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CCDC50Q8IVM0 306 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 KLHL7Q8IXQ5 586 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 SLC43A3Q8NBI5 491 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 AP1M1Q9BXS5 423 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 SEZ6LQ9BYH1 1024 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 OSBPL7Q9BZF2 842 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 DPEP3Q9H4B8 488 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 PAK6Q9NQU5 681 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 STIM2Q9P246 746 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CACNG4Q9UBN1 327 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 TJP2Q9UDY2 1190 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 CYTH4Q9UIA0 394 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 KIAA1257Q9ULG3 409 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 TTC7AQ9ULT0 858 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 PTPN22Q9Y2R2 807 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 COL4A6Q14031 1691 aa8.53□□□□□ -1.04
PDZRN3-212ENST00000498048 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.04
PDZRN3-212ENST00000498048 E5RJQ4 531 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 CYB561D2O14569 222 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 RAD51CO43502 376 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 HCRTO43612 131 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 ZNF623O75123 536 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 PHF2O75151 1096 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 SEC31AO94979 1220 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 FGFR1P11362 822 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 ODC1P11926 461 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 CCL5P13501 91 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 PSMA2P25787 234 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 ADORA2BP29275 332 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 CLCNKBP51801 687 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 LILRA4P59901 499 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 RPL7AP62424 266 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 BST2Q10589 180 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 BFSP2Q13515 415 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 GLE1Q53GS7 698 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 ZFYVE27Q5T4F4 411 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 DAB2IPQ5VWQ8 1189 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 ARHGAP17Q68EM7 881 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 AADACL2Q6P093 401 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 TTC30AQ86WT1 665 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 RHOT1Q8IXI2 618 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 GSPT2Q8IYD1 628 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 WDTC1Q8N5D0 677 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 C12orf29Q8N999 325 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 B3GALNT2Q8NCR0 500 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 UBA3Q8TBC4 463 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 URGCPQ8TCY9 931 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 LINC01599Q8WXQ3 324 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 C18orf8Q96DM3 657 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 TNIP3Q96KP6 325 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 DEFB118Q96PH6 123 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 LRRC1Q9BTT6 524 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 DDX47Q9H0S4 455 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 SLITRK6Q9H5Y7 841 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 ARFGAP3Q9NP61 516 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 UBN1Q9NPG3 1134 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 TMEM59LQ9UK28 342 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 PCDHA3Q9Y5H8 950 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 DNAH12Q6ZR08 3092 aa8.52□□□□□ -1.05
PDZRN3-212ENST00000498048 A0A0U1RQF3 1178 aa8.51□□□□□ -1.05
PDZRN3-212ENST00000498048 TMEM191CA6NGB0 347 aa8.51□□□□□ -1.05
PDZRN3-212ENST00000498048 PIK3R2O00459 728 aa8.51□□□□□ -1.05
PDZRN3-212ENST00000498048 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms