RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PNKPQ96T60 521 aa4.85□□□□□ -1.63
SMC4-225ENST00000497203 PRRX2Q99811 253 aa4.85□□□□□ -1.63
SMC4-225ENST00000497203 SPATA5L1Q9BVQ7 753 aa4.85□□□□□ -1.63
SMC4-225ENST00000497203 ALOXE3Q9BYJ1 711 aa4.85□□□□□ -1.63
SMC4-225ENST00000497203 WDR12Q9GZL7 423 aaKnown RBP4.85□□□□□ -1.63
SMC4-225ENST00000497203 ZSCAN32Q9NX65 697 aa4.85□□□□□ -1.63
SMC4-225ENST00000497203 VSX1Q9NZR4 365 aaPredicted RBP4.85□□□□□ -1.63
SMC4-225ENST00000497203 KCNE5Q9UJ90 142 aa4.85□□□□□ -1.63
SMC4-225ENST00000497203 COL4A3Q01955 1670 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 ADAMTS3O15072 1205 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 FOXN1O15353 648 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 INMTO95050 263 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 MT-ND5P03915 603 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 FGFR2P21802 821 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 VIPR2P41587 438 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 CARSP49589 748 aaKnown RBP4.84□□□□□ -1.63
SMC4-225ENST00000497203 MAPK10P53779 464 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 UCP3P55916 312 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 HTRA4P83105 476 aaPredicted RBP4.84□□□□□ -1.63
SMC4-225ENST00000497203 PMS2P11Q13670 270 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 PDCD2Q16342 344 aaPredicted RBP4.84□□□□□ -1.63
SMC4-225ENST00000497203 ARL13BQ3SXY8 428 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 SPDYE7PQ495Y7 208 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 PGBD2Q6P3X8 592 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 Q6YL49 198 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 RNF44Q7L0R7 432 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 YAF2Q8IY57 180 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 SYTL1Q8IYJ3 562 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 PDPRQ8NCN5 879 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 BEND2Q8NDZ0 799 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 FAM46DQ8NEK8 389 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 SPSB4Q96A44 273 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 TMEM41AQ96HV5 264 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 MED15Q96RN5 788 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 PTPRHQ9HD43 1115 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 XPR1Q9UBH6 696 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 ITGB1BP2Q9UKP3 347 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 MTO1Q9Y2Z2 717 aaKnown RBP4.84□□□□□ -1.63
SMC4-225ENST00000497203 NEU2Q9Y3R4 380 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 NOX1Q9Y5S8 564 aa4.84□□□□□ -1.63
SMC4-225ENST00000497203 A0A087X1B8 175 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 PIPSLA2A3N6 862 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 TMEM191CA6NGB0 347 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 POLRMTO00411 1230 aaKnown RBP4.83□□□□□ -1.64
SMC4-225ENST00000497203 HNRNPDLO14979 420 aaKnown RBP4.83□□□□□ -1.64
SMC4-225ENST00000497203 AREL1O15033 823 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 CREB3O43889 395 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 RAMP2O60895 175 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 RASSF9O75901 435 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 SOAT2O75908 522 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 KIF20AO95235 890 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
SMC4-225ENST00000497203 TRAPPC10P48553 1259 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 STARD3Q14849 445 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 CYP2A13Q16696 494 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 PRR16Q569H4 304 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 KLHDC7AQ5VTJ3 777 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 ANO1Q5XXA6 986 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 ARMC6Q6NXE6 501 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 ERAP2Q6P179 960 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 FOXR2Q6PJQ5 311 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.83□□□□□ -1.64
SMC4-225ENST00000497203 CATSPERGQ6ZRH7 1159 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 PPP1R32Q7Z5V6 425 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 SKAP1Q86WV1 359 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 CFAP52Q8N1V2 620 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 TXLNBQ8N3L3 684 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 Q8NA96 180 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 SMCR8Q8TEV9 937 aaPredicted RBP4.83□□□□□ -1.64
SMC4-225ENST00000497203 ZNF566Q969W8 418 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 BOD1Q96IK1 185 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 HERPUD2Q9BSE4 406 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 CRB3Q9BUF7 120 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 STK31Q9BXU1 1019 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
SMC4-225ENST00000497203 PPCSQ9HAB8 311 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 GALNT9Q9HCQ5 603 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 TMEM74BQ9NUR3 256 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 SYBUQ9NX95 663 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 RNF181Q9P0P0 153 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 ZNF212Q9UDV6 495 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 AGAP1Q9UPQ3 857 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 CDYLQ9Y232 598 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 PCDHGB2Q9Y5G2 931 aa4.83□□□□□ -1.64
SMC4-225ENST00000497203 WDR33Q9C0J8 1336 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 hCG_1642624A0A1W2PR95 340 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 E9PLN8 166 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 ERN1O75460 977 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 TXNP10599 105 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 ITGAMP11215 1152 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 HARSP12081 509 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 MYL4P12829 197 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 FDXRP22570 491 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 PROZP22891 400 aa4.82□□□□□ -1.64
SMC4-225ENST00000497203 EEF1GP26641 437 aaKnown RBP4.82□□□□□ -1.64
SMC4-225ENST00000497203 HSPA7P48741 367 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms