RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 AKAP3O75969 853 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 MICAL2O94851 1124 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 MYL1P05976 194 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 BDNFP23560 247 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 NR2F2P24468 414 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 PCSK1P29120 753 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 SOX9P48436 509 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 NLRP12P59046 1061 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 TNNC1P63316 161 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 CYP27A1Q02318 531 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 NCOA4Q13772 614 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 KCNB1Q14721 858 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 NFE2Q16621 373 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 FAM171BQ6P995 826 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 SLC9A9Q8IVB4 645 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 PJA1Q8NG27 643 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 RIN3Q8TB24 985 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 C2orf15Q8WU43 125 aaKnown RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 ATOH1Q92858 354 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 TRMT61BQ9BVS5 477 aaKnown RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 DLGAP2Q9P1A6 1054 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 HSFX1Q9UBD0 423 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 HMGXB4Q9UGU5 601 aa13.06□□□□□ -0.32
HDLBP-246ENST00000496569 NDRG2Q9UN36 371 aaKnown RBP13.06□□□□□ -0.32
HDLBP-246ENST00000496569 RIF1Q5UIP0 2472 aaKnown RBP13.05□□□□□ -0.32
HDLBP-246ENST00000496569 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 CALUO43852 315 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-246ENST00000496569 HLA-DRAP01903 254 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 F11P03951 625 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 PSMC3P17980 439 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 MRE11P49959 708 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 STARD6P59095 220 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 USP46P62068 366 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 ZCWPW2Q504Y3 356 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 TXNDC8Q6A555 127 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 PHLDB3Q6NSJ2 640 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 SV2AQ7L0J3 742 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 DPH6Q7L8W6 267 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
HDLBP-246ENST00000496569 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 GCNAQ96QF7 691 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 TRPV4Q9HBA0 871 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 LTB4R2Q9NPC1 389 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 CDH9Q9ULB4 789 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 TRAF3IP3Q9Y228 551 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 CCL26Q9Y258 94 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 FAM186AA6NE01 2351 aa13.05□□□□□ -0.32
HDLBP-246ENST00000496569 KANSL1LA0AUZ9 987 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 A8MXQ7 604 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 ARNTLO00327 626 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 CSH1P0DML2 217 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 CSH2P0DML3 217 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 CDC25CP30307 473 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-246ENST00000496569 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 PRCPP42785 496 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 GCLMP48507 274 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 VAMP7P51809 220 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
HDLBP-246ENST00000496569 CLDN10P78369 228 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 PFKPQ01813 784 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 TNK2Q07912 1038 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 SMARCB1Q12824 385 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-246ENST00000496569 ANGPT1Q15389 498 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 ZACNQ401N2 412 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 ARHGAP15Q53QZ3 475 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 ZNF667Q5HYK9 610 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 FAM186BQ8IYM0 893 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 SPATA18Q8TC71 538 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 SYAP1Q96A49 352 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-246ENST00000496569 SLC22A12Q96S37 553 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 DDX23Q9BUQ8 820 aaKnown RBP13.04□□□□□ -0.32
HDLBP-246ENST00000496569 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 TASP1Q9H6P5 420 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 TRPC7Q9HCX4 862 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 ABCB6Q9NP58 842 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 MAGEC2Q9UBF1 373 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-246ENST00000496569 FRMD4BQ9Y2L6 1034 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 SIT1Q9Y3P8 196 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 PCDHA5Q9Y5H7 936 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 WDR87Q6ZQQ6 2873 aa13.04□□□□□ -0.32
HDLBP-246ENST00000496569 FAM170BA6NMN3 283 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 F8VP50 259 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 ZNF263O14978 683 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 TACC1O75410 805 aa13.03□□□□□ -0.32
HDLBP-246ENST00000496569 NOL4O94818 638 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms