RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 CA14Q9ULX7 337 aa18.76■□□□□ 0.59
RHBDD3-207ENST00000496342 MAGED2Q9UNF1 606 aaPredicted RBP18.76■□□□□ 0.59
RHBDD3-207ENST00000496342 MIA3Q5JRA6 1907 aa18.76■□□□□ 0.59
RHBDD3-207ENST00000496342 CLDN5O00501 218 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 HMGA1P17096 107 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 ASPAP45381 313 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 CACNA2D1P54289 1103 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 VCPP55072 806 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 NOP14P78316 857 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 FKBP3Q00688 224 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 LRRC63Q05C16 580 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 STIM1Q13586 685 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 GRM2Q14416 872 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 TCERG1LQ5VWI1 586 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 TTI2Q6NXR4 508 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 MTSS1LQ765P7 747 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 ITIH5Q86UX2 942 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 RSPRY1Q96DX4 576 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 DHTKD1Q96HY7 919 aaPredicted RBP18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 IPO9Q96P70 1041 aaKnown RBP18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 ZNF518BQ9C0D4 1074 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 ATXN3LQ9H3M9 355 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 TMEM8AQ9HCN3 771 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 LMBRD1Q9NUN5 540 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 TMEM30AQ9NV96 361 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 GDE1Q9NZC3 331 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 ASB3Q9Y575 518 aa18.75■□□□□ 0.59
RHBDD3-207ENST00000496342 SLC16A3O15427 465 aaKnown RBP18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 SRFP11831 508 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 PTPN1P18031 435 aaKnown RBP18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 VIPR2P41587 438 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 MXI1P50539 228 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 GPC5P78333 572 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 SGSM1Q2NKQ1 1148 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 CFAP221Q4G0U5 840 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 CBWD6Q4V339 395 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 CBWD3Q5JTY5 395 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 CBWD5Q5RIA9 395 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 TMEM150AQ86TG1 271 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 LEMD2Q8NC56 503 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 ZSCAN18Q8TBC5 510 aaPredicted RBP18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 MYCBPAPQ8TBZ2 947 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 ASB16Q96NS5 453 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 ABCB6Q9NP58 842 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 KIAA1468Q9P260 1216 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 MAGEC2Q9UBF1 373 aaPredicted RBP18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 FBXL21Q9UKT6 434 aa18.74■□□□□ 0.59
RHBDD3-207ENST00000496342 ZDBF2Q9HCK1 2354 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 KRBA1A5PL33 1030 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 TADA3O75528 432 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 TAF12Q16514 161 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 GPR158Q5T848 1215 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 KRT39Q6A163 491 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 C4orf50Q6ZRC1 276 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 CLEC17AQ6ZS10 378 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 ACOT1Q86TX2 421 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 SIX5Q8N196 739 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 B3GALNT2Q8NCR0 500 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 NXPE3Q969Y0 559 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 TWNKQ96RR1 684 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 B3GNT5Q9BYG0 378 aa18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 SMG9Q9H0W8 520 aaKnown RBP18.73■□□□□ 0.59
RHBDD3-207ENST00000496342 MICAL2O94851 1124 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 CD58P19256 250 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 NDST1P52848 882 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 MCCD1P59942 119 aaPredicted RBP18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 ENPEPQ07075 957 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 PAK1Q13153 545 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 CWF19L1Q69YN2 538 aaKnown RBP18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 VITQ6UXI7 678 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 BMP8AQ7Z5Y6 402 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 FBXL6Q8N531 539 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 SLC35C1Q96A29 364 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 FUBP3Q96I24 572 aaKnown RBP eCLIP18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 BCO2Q9BYV7 579 aa18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 GTPBP4Q9BZE4 634 aaKnown RBP18.72■□□□□ 0.59
RHBDD3-207ENST00000496342 F8VP50 259 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 ECI2O75521 394 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 NOL4O94818 638 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 PRAMEF12O95522 483 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 F11P03951 625 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 CSH1P0DML2 217 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 CSH2P0DML3 217 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 CCDC130P13994 396 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 NPR3P17342 541 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 GRIK1P39086 918 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 MAGEA11P43364 429 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 NLRP12P59046 1061 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 USP46P62068 366 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 RPL10AP62906 217 aaKnown RBP18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 FLCNQ8NFG4 579 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 TAF4BQ92750 862 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 SMARCD2Q92925 531 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 ARID3AQ99856 593 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 NIF3L1Q9GZT8 377 aa18.71■□□□□ 0.59
RHBDD3-207ENST00000496342 ZFP14Q9HCL3 533 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms