RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 MYRFLQ96LU7 910 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 TMEM30AQ9NV96 361 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 NXF1Q9UBU9 619 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 FBXL21Q9UKT6 434 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 CA14Q9ULX7 337 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 CACNA1HO95180 2353 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 FRYLO94915 3013 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 ARNTLO00327 626 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 LRRN2O75325 713 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 NOL4O94818 638 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 FGF19O95750 216 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 PTPN1P18031 435 aaKnown RBP13.16□□□□□ -0.3
TRIM59-207ENST00000496222 AOC1P19801 751 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 GCLMP48507 274 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 NLRP12P59046 1061 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 TNNC1P63316 161 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 SGSM1Q2NKQ1 1148 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 SPOPLQ6IQ16 392 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 PHLDB3Q6NSJ2 640 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 SPATA2LQ8IUW3 424 aaPredicted RBP13.16□□□□□ -0.3
TRIM59-207ENST00000496222 OR6B3Q8NGW1 331 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
TRIM59-207ENST00000496222 SLC46A2Q9BY10 475 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
TRIM59-207ENST00000496222 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 DLGAP2Q9P1A6 1054 aa13.16□□□□□ -0.3
TRIM59-207ENST00000496222 ANAPC1Q9H1A4 1944 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
TRIM59-207ENST00000496222 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 SLC38A8A6NNN8 435 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 HEPACAM2A8MVW5 462 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 PRAMEF12O95522 483 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 CSH1P0DML2 217 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 CSH2P0DML3 217 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 BDNFP23560 247 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 PLA2G5P39877 138 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 ASPAP45381 313 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 RPL10AP62906 217 aaKnown RBP13.15□□□□□ -0.3
TRIM59-207ENST00000496222 CYP4F8P98187 520 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 MORC3Q14149 939 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 GRM2Q14416 872 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 GPR158Q5T848 1215 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 C4orf50Q6ZRC1 276 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 PAQR9Q6ZVX9 377 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 ARID3BQ8IVW6 561 aaPredicted RBP13.15□□□□□ -0.3
TRIM59-207ENST00000496222 MFSD6LQ8IWD5 586 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 FLCNQ8NFG4 579 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 TAF4BQ92750 862 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 SEMA4DQ92854 862 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 DUSP9Q99956 384 aaKnown RBP13.15□□□□□ -0.3
TRIM59-207ENST00000496222 B3GNT5Q9BYG0 378 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 BCO2Q9BYV7 579 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 SNX25Q9H3E2 840 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 MFSD1Q9H3U5 465 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 TASP1Q9H6P5 420 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 TBC1D17Q9HA65 648 aa13.15□□□□□ -0.3
TRIM59-207ENST00000496222 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
TRIM59-207ENST00000496222 ZNF638Q14966 1978 aaKnown RBP13.14□□□□□ -0.31
TRIM59-207ENST00000496222 CETN3O15182 167 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
TRIM59-207ENST00000496222 GLULP15104 373 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 PSMC3P17980 439 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 CCNE1P24864 410 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 CDC25CP30307 473 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 GTF2H1P32780 548 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 NUBP1P53384 320 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 USP46P62068 366 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 UBE2HP62256 183 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 NHLH1Q02575 133 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 FCHO2Q0JRZ9 810 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 MAPRE1Q15691 268 aaKnown RBP13.14□□□□□ -0.31
TRIM59-207ENST00000496222 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 CEP295NLQ96MC4 621 aa13.14□□□□□ -0.31
TRIM59-207ENST00000496222 TRMT61BQ9BVS5 477 aaKnown RBP13.14□□□□□ -0.31
TRIM59-207ENST00000496222 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms