RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 SYCE1Q8N0S2 351 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 ANKRD52Q8NB46 1076 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 TPCN2Q8NHX9 752 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 MYCBPAPQ8TBZ2 947 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 UBE2Q2Q8WVN8 375 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 ZNF592Q92610 1267 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 RTP3Q9BQQ7 232 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 MRPL47Q9HD33 250 aaKnown RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 CTTNBP2NLQ9P2B4 639 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 WDR35Q9P2L0 1181 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 JRKLQ9Y4A0 524 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 TIMM13Q9Y5L4 95 aaPredicted RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 OBSL1O75147 1896 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 ATG2AQ2TAZ0 1938 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 ZBBXA8MT70 800 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 ATP2C2O75185 946 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 CCDC130P13994 396 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 LAG3P18627 525 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 FGFR3P22607 806 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 RRM1P23921 792 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 GABRB2P47870 512 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 SLC8A3P57103 927 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 TSPY1Q01534 308 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 TAP1Q03518 808 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 PDCLQ13371 301 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 MDH1BQ5I0G3 518 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 INTS6LQ5JSJ4 861 aaKnown RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 TMEM240Q5SV17 173 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 PLEKHA7Q6IQ23 1121 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 FUT10Q6P4F1 479 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 FAM171BQ6P995 826 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 SLFN11Q7Z7L1 901 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 TTC30AQ86WT1 665 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 LRRC57Q8N9N7 239 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 UBA3Q8TBC4 463 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 ZNF564Q8TBZ8 553 aaPredicted RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 SLC2A14Q8TDB8 520 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 SLC35F5Q8WV83 523 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 C18orf8Q96DM3 657 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 NUP85Q9BW27 656 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 OXCT2Q9BYC2 517 aaPredicted RBP11.66□□□□□ -0.54
PKP4-215ENST00000494945 OSGEPQ9NPF4 335 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 CRTAC1Q9NQ79 661 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 PARVAQ9NVD7 372 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 CYTH4Q9UIA0 394 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 COG5Q9UP83 839 aa11.66□□□□□ -0.54
PKP4-215ENST00000494945 ANAPC1Q9H1A4 1944 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 FANCGO15287 622 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 PALMO75781 387 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 EFEMP2O95967 443 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 ADORA2BP29275 332 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 TKTP29401 623 aaKnown RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 RPL34P49207 117 aaKnown RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 PDE4CQ08493 712 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 TUBB2AQ13885 445 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 SPOUT1Q5T280 376 aaKnown RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 FAM171A1Q5VUB5 890 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 C11orf63Q6NUN7 778 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 FAM117BQ6P1L5 589 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 KCNT2Q6UVM3 1135 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 C3orf20Q8ND61 904 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 ABHD8Q96I13 439 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 ZNF558Q96NG5 402 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 CPXM1Q96SM3 734 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 SLC9A7Q96T83 725 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 YME1L1Q96TA2 773 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 PKMYT1Q99640 499 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 LBHD1Q9BQE6 289 aaPredicted RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 LPIN3Q9BQK8 851 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
PKP4-215ENST00000494945 MED10Q9BTT4 135 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 TUBB2BQ9BVA1 445 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 DUSP16Q9BY84 665 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 GPR62Q9BZJ7 368 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 MTIF3Q9H2K0 278 aaKnown RBP11.65□□□□□ -0.54
PKP4-215ENST00000494945 SYNCQ9H7C4 482 aa11.65□□□□□ -0.54
PKP4-215ENST00000494945 TCRBV5S1A1TA0A578 114 aa11.64□□□□□ -0.55
PKP4-215ENST00000494945 FAM170AA1A519 330 aa11.64□□□□□ -0.55
PKP4-215ENST00000494945 MYBPHLA2RUH7 354 aa11.64□□□□□ -0.55
PKP4-215ENST00000494945 OR6C75A6NL08 312 aa11.64□□□□□ -0.55
PKP4-215ENST00000494945 H7C4K7 107 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms