RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PHLDB2Q86SQ0 1253 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CAND1Q86VP6 1230 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 TMEM40Q8WWA1 233 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 PRPF31Q8WWY3 499 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 ALPK1Q96QP1 1244 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CCSER1Q9C0I3 900 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CCSER2Q9H7U1 834 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 CDHR5Q9HBB8 845 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 RMND1Q9NWS8 449 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.45
BRCA1-222ENST00000493919 FAM32AQ9Y421 112 aaKnown RBP12.21□□□□□ -0.45
BRCA1-222ENST00000493919 A0A087WZ62 844 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 CCDC163A0A0D9SF12 145 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 GPR32O75388 356 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 LCA5LO95447 670 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 CXCL10P02778 98 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 PLA2G4BP0C869 781 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 ACTN1P12814 892 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 CD52P31358 61 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 BMP8BP34820 402 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 RUNX1T1Q06455 604 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 NIPAL4Q0D2K0 466 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 TRAP1Q12931 704 aaKnown RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 FAM133BQ5BKY9 247 aaKnown RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 NEK5Q6P3R8 708 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 CNKSR3Q6P9H4 555 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 TMEM87AQ8NBN3 555 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 SEPT8Q92599 483 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 P3H4Q92791 437 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 VWCEQ96DN2 955 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 CATSPER2Q96P56 530 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 B3GNT4Q9C0J1 378 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 SCAND2PQ9GZW5 306 aaPredicted RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.46
BRCA1-222ENST00000493919 C12orf10Q9HB07 376 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 POLD4Q9HCU8 107 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 MRGBPQ9NV56 204 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 EXOC7Q9UPT5 735 aa12.21□□□□□ -0.46
BRCA1-222ENST00000493919 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 KMOO15229 486 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 YKT6O15498 198 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 KLHL41O60662 606 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 CSDE1O75534 798 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 GSTT2P0CG29 244 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 GSTT2BP0CG30 244 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 STAT6P42226 847 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 CCNG1P51959 295 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 CRYBB1P53674 252 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 MRPS25P82663 173 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 MYO1EQ12965 1108 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 PLEKHG4Q58EX7 1191 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 DEPDC1Q5TB30 811 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 SARM1Q6SZW1 724 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 RNF149Q8NC42 400 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 ASAP3Q8TDY4 903 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 LRRC15Q8TF66 581 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 NCSTNQ92542 709 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 LARP4BQ92615 738 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 RAD54LQ92698 747 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 SLC39A13Q96H72 371 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 MED30Q96HR3 178 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 GBA3Q9H227 469 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
BRCA1-222ENST00000493919 AGO3Q9H9G7 860 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 PIH1D1Q9NWS0 290 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
BRCA1-222ENST00000493919 CCDC169A6NNP5 214 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 GLI1P08151 1106 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 FGFR4P22455 802 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 CHKAP35790 457 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 THOP1P52888 689 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 USP46P62068 366 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 METTL11BQ5VVY1 283 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 IL23RQ5VWK5 629 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 ZNF410Q86VK4 478 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 GPBP1Q86WP2 473 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 TEX19Q8NA77 164 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 AIFM2Q9BRQ8 373 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 TTPALQ9BTX7 342 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 FAM129AQ9BZQ8 928 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms