RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 KRT13P13646 458 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 P4HA1P13674 534 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 MAGEA11P43364 429 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 VAMP7P51809 220 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 DLG4P78352 724 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 DDR2Q16832 855 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 SDHAF4Q5VUM1 108 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 TPRG1Q6ZUI0 275 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 INTS8Q75QN2 995 aaKnown RBP16.12■□□□□ 0.17
USP39-217ENST00000491659 ARID3BQ8IVW6 561 aaPredicted RBP16.12■□□□□ 0.17
USP39-217ENST00000491659 MFSD6LQ8IWD5 586 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 SCN4BQ8IWT1 228 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 YAF2Q8IY57 180 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 FAM186BQ8IYM0 893 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 SMYD4Q8IYR2 804 aaPredicted RBP16.12■□□□□ 0.17
USP39-217ENST00000491659 ENGASEQ8NFI3 743 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 PJA1Q8NG27 643 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 GSDMAQ96QA5 445 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 MKNK1Q9BUB5 465 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 FOXQ1Q9C009 403 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 SIT1Q9Y3P8 196 aa16.12■□□□□ 0.17
USP39-217ENST00000491659 KIF26AQ9ULI4 1882 aaPredicted RBP16.12■□□□□ 0.17
USP39-217ENST00000491659 KANSL1LA0AUZ9 987 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 SLC38A8A6NNN8 435 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 A8MXQ7 604 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 H0Y858 1186 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 IKBKBO14920 756 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 ZNF263O14978 683 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 NOL4O94818 638 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 HMGA1P17096 107 aaKnown RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 DDX6P26196 483 aaKnown RBP eCLIP16.11■□□□□ 0.175e-6■■■■■ 34.8
USP39-217ENST00000491659 ANXA13P27216 316 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 PSMC2P35998 433 aaKnown RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 PIK3CAP42336 1068 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 NLRP12P59046 1061 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 EDRF1Q3B7T1 1238 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 ZACNQ401N2 412 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 MDH1BQ5I0G3 518 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 ZNF658Q5TYW1 1059 aaPredicted RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 VSTM1Q6UX27 236 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 SCARA5Q6ZMJ2 495 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 DTWD2Q8NBA8 298 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 STKLD1Q8NE28 680 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 MYCBPAPQ8TBZ2 947 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 MRPS31Q92665 395 aaKnown RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 ATOH1Q92858 354 aaPredicted RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 TRMT2BQ96GJ1 504 aaKnown RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 DDX23Q9BUQ8 820 aaKnown RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 GTPBP4Q9BZE4 634 aaKnown RBP16.11■□□□□ 0.17
USP39-217ENST00000491659 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 SMYD3Q9H7B4 428 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 HEBP1Q9NRV9 189 aa16.11■□□□□ 0.17
USP39-217ENST00000491659 PATJQ8NI35 1801 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 TRIM66O15016 1216 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 KINO60870 393 aaKnown RBP16.1■□□□□ 0.17
USP39-217ENST00000491659 AKAP3O75969 853 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 VNN1O95497 513 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 BDNFP23560 247 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 WEE1P30291 646 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 GRIK1P39086 918 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 ENPEPQ07075 957 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 ADAM9Q13443 819 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 UBXN2BQ14CS0 331 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 SGSM1Q2NKQ1 1148 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 ZCWPW2Q504Y3 356 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 CSGALNACT1Q8TDX6 532 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 TAF4BQ92750 862 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 PCED1BQ96HM7 432 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 CEP295NLQ96MC4 621 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 TSG101Q99816 390 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 LTB4R2Q9NPC1 389 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 OBP2AQ9NY56 170 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 MRPS17Q9Y2R5 130 aaKnown RBP16.1■□□□□ 0.17
USP39-217ENST00000491659 NCANO14594 1321 aa16.1■□□□□ 0.17
USP39-217ENST00000491659 HELZP42694 1942 aaKnown RBP16.09■□□□□ 0.17
USP39-217ENST00000491659 CHADO15335 359 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 F11P03951 625 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 DCNP07585 359 aaKnown RBP16.09■□□□□ 0.17
USP39-217ENST00000491659 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
USP39-217ENST00000491659 PTPN1P18031 435 aaKnown RBP16.09■□□□□ 0.17
USP39-217ENST00000491659 AVPR1AP37288 418 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 RAP1GAPP47736 663 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 FCHO2Q0JRZ9 810 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 ZNF852Q6ZMS4 543 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 SV2AQ7L0J3 742 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 CMTM8Q8IZV2 173 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 MAB21L3Q8N8X9 362 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 B3GALNT2Q8NCR0 500 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 RSPRY1Q96DX4 576 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 MYRFLQ96LU7 910 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 OSBPL6Q9BZF3 934 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 DPEP3Q9H4B8 488 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 TRPV5Q9NQA5 729 aa16.09■□□□□ 0.17
USP39-217ENST00000491659 FAM86C1Q9NVL1 165 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms