RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KBTBD7Q8WVZ9 684 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 MRPS31Q92665 395 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 PAGE5Q96GU1 130 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 MSANTD3Q96H12 275 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 FUBP3Q96I24 572 aaKnown RBP eCLIP8.85□□□□□ -0.99
LSM2-213ENST00000491421 ZFYVE19Q96K21 471 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 LRRC3BQ96PB8 259 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 SYT15Q9BQS2 421 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 SLC46A2Q9BY10 475 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 SMG9Q9H0W8 520 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 C8orf33Q9H7E9 229 aaPredicted RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 THG1LQ9NWX6 298 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 UXTQ9UBK9 157 aaPredicted RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 MYBPHLA2RUH7 354 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 SPECC1L-ADORA2AF8WAN1 911 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 KLRC4O43908 158 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 KINO60870 393 aaKnown RBP8.84□□□□□ -0.99
LSM2-213ENST00000491421 ATP2C2O75185 946 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 NOL4O94818 638 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 CST3P01034 146 aaPredicted RBP8.84□□□□□ -0.99
LSM2-213ENST00000491421 F11P03951 625 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 PDGFRBP09619 1106 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 ANK1P16157 1881 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 LMO2P25791 158 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 MAGEA11P43364 429 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 SOX9P48436 509 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 TNNC1P63316 161 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 TRPC3Q13507 836 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 MAPRE1Q15691 268 aaKnown RBP8.84□□□□□ -0.99
LSM2-213ENST00000491421 KMT5BQ4FZB7 885 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 TXNDC8Q6A555 127 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 FAM171BQ6P995 826 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 TTC8Q8TAM2 541 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 MYLPFQ96A32 169 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 TRMT2BQ96GJ1 504 aaKnown RBP8.84□□□□□ -0.99
LSM2-213ENST00000491421 CHAMP1Q96JM3 812 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 IER2Q9BTL4 223 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 CHRDQ9H2X0 955 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 SNX25Q9H3E2 840 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 LMAN1LQ9HAT1 526 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 CRTAC1Q9NQ79 661 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 PRMT8Q9NR22 394 aaPredicted RBP8.84□□□□□ -0.99
LSM2-213ENST00000491421 GTSE1Q9NYZ3 720 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 MAGEC2Q9UBF1 373 aaPredicted RBP8.84□□□□□ -0.99
LSM2-213ENST00000491421 USP25Q9UHP3 1055 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 CDH9Q9ULB4 789 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 ZDHHC9Q9Y397 364 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 PCDHGA2Q9Y5H1 932 aa8.84□□□□□ -0.99
LSM2-213ENST00000491421 SCN1AP35498 2009 aa8.83□□□□□ -1
LSM2-213ENST00000491421 FRYLO94915 3013 aa8.83□□□□□ -1
LSM2-213ENST00000491421 SOBPA7XYQ1 873 aa8.83□□□□□ -1
LSM2-213ENST00000491421 PHACTR2O75167 634 aa8.83□□□□□ -1
LSM2-213ENST00000491421 TACC1O75410 805 aa8.83□□□□□ -1
LSM2-213ENST00000491421 CLSTN1O94985 981 aa8.83□□□□□ -1
LSM2-213ENST00000491421 MYL1P05976 194 aa8.83□□□□□ -1
LSM2-213ENST00000491421 BDNFP23560 247 aa8.83□□□□□ -1
LSM2-213ENST00000491421 CTHP32929 405 aa8.83□□□□□ -1
LSM2-213ENST00000491421 GNL1P36915 607 aaPredicted RBP8.83□□□□□ -1
LSM2-213ENST00000491421 SYKP43405 635 aa8.83□□□□□ -1
LSM2-213ENST00000491421 CASP4P49662 377 aa8.83□□□□□ -1
LSM2-213ENST00000491421 MYL6P60660 151 aa8.83□□□□□ -1
LSM2-213ENST00000491421 CYP27A1Q02318 531 aa8.83□□□□□ -1
LSM2-213ENST00000491421 TNK2Q07912 1038 aa8.83□□□□□ -1
LSM2-213ENST00000491421 STK4Q13043 487 aa8.83□□□□□ -1
LSM2-213ENST00000491421 PSMD2Q13200 908 aa8.83□□□□□ -1
LSM2-213ENST00000491421 BIRC3Q13489 604 aa8.83□□□□□ -1
LSM2-213ENST00000491421 LRRC32Q14392 662 aa8.83□□□□□ -1
LSM2-213ENST00000491421 PPP2R5DQ14738 602 aa8.83□□□□□ -1
LSM2-213ENST00000491421 ITPRIPL2Q3MIP1 535 aa8.83□□□□□ -1
LSM2-213ENST00000491421 WDR72Q3MJ13 1102 aa8.83□□□□□ -1
LSM2-213ENST00000491421 MDH1BQ5I0G3 518 aa8.83□□□□□ -1
LSM2-213ENST00000491421 TSSK4Q6SA08 328 aa8.83□□□□□ -1
LSM2-213ENST00000491421 VSTM1Q6UX27 236 aa8.83□□□□□ -1
LSM2-213ENST00000491421 MON1AQ86VX9 555 aa8.83□□□□□ -1
LSM2-213ENST00000491421 RALGPS2Q86X27 583 aaPredicted RBP8.83□□□□□ -1
LSM2-213ENST00000491421 KIAA0895Q8NCT3 520 aa8.83□□□□□ -1
LSM2-213ENST00000491421 OR6B3Q8NGW1 331 aa8.83□□□□□ -1
LSM2-213ENST00000491421 ATRIPQ8WXE1 791 aa8.83□□□□□ -1
LSM2-213ENST00000491421 ZNF516Q92618 1163 aa8.83□□□□□ -1
LSM2-213ENST00000491421 USP13Q92995 863 aaPredicted RBP8.83□□□□□ -1
LSM2-213ENST00000491421 SYAP1Q96A49 352 aaPredicted RBP8.83□□□□□ -1
LSM2-213ENST00000491421 MYRFLQ96LU7 910 aa8.83□□□□□ -1
LSM2-213ENST00000491421 HINFPQ9BQA5 517 aa8.83□□□□□ -1
LSM2-213ENST00000491421 MRPL45Q9BRJ2 306 aaKnown RBP8.83□□□□□ -1
LSM2-213ENST00000491421 GZF1Q9H116 711 aaPredicted RBP8.83□□□□□ -1
LSM2-213ENST00000491421 KIF9Q9HAQ2 790 aa8.83□□□□□ -1
LSM2-213ENST00000491421 TRPC7Q9HCX4 862 aa8.83□□□□□ -1
LSM2-213ENST00000491421 TDP1Q9NUW8 608 aa8.83□□□□□ -1
LSM2-213ENST00000491421 ZSCAN32Q9NX65 697 aa8.83□□□□□ -1
LSM2-213ENST00000491421 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
LSM2-213ENST00000491421 HPSEQ9Y251 543 aa8.83□□□□□ -1
LSM2-213ENST00000491421 CCL26Q9Y258 94 aa8.83□□□□□ -1
LSM2-213ENST00000491421 ATP6V1DQ9Y5K8 247 aa8.83□□□□□ -1
LSM2-213ENST00000491421 GVINP1Q7Z2Y8 2422 aa8.82□□□□□ -1
LSM2-213ENST00000491421 TRAV19A0A0A6YYK7 116 aa8.82□□□□□ -1
LSM2-213ENST00000491421 LRRIQ3A6PVS8 624 aaPredicted RBP8.82□□□□□ -1
LSM2-213ENST00000491421 A8MXQ7 604 aa8.82□□□□□ -1
LSM2-213ENST00000491421 PDXKO00764 312 aa8.82□□□□□ -1
LSM2-213ENST00000491421 TRIM66O15016 1216 aa8.82□□□□□ -1
LSM2-213ENST00000491421 TADA3O75528 432 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms