RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SOWAHAQ2M3V2 549 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 NETO1Q8TDF5 533 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 MRPL44Q9H9J2 332 aaKnown RBP16.73■□□□□ 0.27
COL2A1-207ENST00000490609 PDE11AQ9HCR9 933 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 OLFML3Q9NRN5 406 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 GDAP2Q9NXN4 497 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 DDX43Q9NXZ2 648 aaKnown RBP16.73■□□□□ 0.27
COL2A1-207ENST00000490609 GCNT4Q9P109 453 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 SEL1LQ9UBV2 794 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
COL2A1-207ENST00000490609 NME7Q9Y5B8 376 aa16.73■□□□□ 0.27
COL2A1-207ENST00000490609 PI4KAP42356 2102 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 SOBPA7XYQ1 873 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 ATP2C2O75185 946 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 GARTP22102 1010 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 GJA4P35212 333 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 TFAMQ00059 246 aaKnown RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 ZNF268Q14587 947 aaPredicted RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 ZNF77Q15935 545 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 CCDC6Q16204 474 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 INTS6LQ5JSJ4 861 aaKnown RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 FAM171BQ6P995 826 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 KBTBD6Q86V97 674 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 KBTBD7Q8WVZ9 684 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 TRMT2BQ96GJ1 504 aaKnown RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 ACCSQ96QU6 501 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
COL2A1-207ENST00000490609 THG1LQ9NWX6 298 aaKnown RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 MAGED2Q9UNF1 606 aaPredicted RBP16.72■□□□□ 0.27
COL2A1-207ENST00000490609 AXIN1O15169 862 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 CSH1P0DML2 217 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 CSH2P0DML3 217 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 GAP43P17677 238 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 LMO2P25791 158 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 DDX6P26196 483 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL2A1-207ENST00000490609 AVPR1AP37288 418 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 SF3A2Q15428 464 aaKnown RBP16.71■□□□□ 0.27
COL2A1-207ENST00000490609 GAB4Q2WGN9 574 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 PLA2G2CQ5R387 149 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 RRAGBQ5VZM2 374 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 LMBRD2Q68DH5 695 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-207ENST00000490609 SV2BQ7L1I2 683 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-207ENST00000490609 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 GAB3Q8WWW8 586 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 HPS3Q969F9 1004 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 ARRDC1-AS1Q9H2J1 176 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 LINC00597Q9H2U6 94 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 ABCB6Q9NP58 842 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 RBAKQ9NYW8 714 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-207ENST00000490609 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 SPEGQ15772 3267 aa16.71■□□□□ 0.27
COL2A1-207ENST00000490609 CCDC163A0A0D9SF12 145 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 C2orf78A6NCI8 922 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 RNF40O75150 1001 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 PRPF6O94906 941 aaKnown RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 GCNT3O95395 438 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 SYT1P21579 422 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 PNPLA4P41247 253 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 NFE2Q16621 373 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 EML3Q32P44 896 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 PPM1JQ5JR12 505 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 GCNAQ96QF7 691 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 SMOC1Q9H4F8 434 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 ECT2Q9H8V3 914 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 CRTAC1Q9NQ79 661 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
COL2A1-207ENST00000490609 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
COL2A1-207ENST00000490609 ASCC3Q8N3C0 2202 aaKnown RBP16.69■□□□□ 0.26
COL2A1-207ENST00000490609 DMXL2Q8TDJ6 3036 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 EPN2O95208 641 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 ZNF806P0C7X5 589 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 USP46P62068 366 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 TSPY1Q01534 308 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 BFSP1Q12934 665 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 USP4Q13107 963 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 TAF12Q16514 161 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 TOP6BLQ8N6T0 577 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 OSCP1Q8WVF1 389 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 ZC3H10Q96K80 434 aaKnown RBP16.69■□□□□ 0.26
COL2A1-207ENST00000490609 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
COL2A1-207ENST00000490609 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 TMEM30AQ9NV96 361 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
COL2A1-207ENST00000490609 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms