RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 NAIF1Q69YI7 327 aaPredicted RBP12.68□□□□□ -0.38
SRSF4-204ENST00000489898 Q6ZS52 159 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 SLC9A9Q8IVB4 645 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 ELMOD1Q8N336 334 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 CSGALNACT2Q8N6G5 542 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 XXYLT1Q8NBI6 393 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 ZBTB44Q8NCP5 570 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 USP13Q92995 863 aaPredicted RBP12.68□□□□□ -0.38
SRSF4-204ENST00000489898 HPDLQ96IR7 371 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 SYT15Q9BQS2 421 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 TRMT61BQ9BVS5 477 aaKnown RBP12.68□□□□□ -0.38
SRSF4-204ENST00000489898 OBP2AQ9NY56 170 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 GCNT4Q9P109 453 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 PIAS3Q9Y6X2 628 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 CEP192Q8TEP8 1941 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 FAM170BA6NMN3 283 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 OLFM2O95897 454 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
SRSF4-204ENST00000489898 CTHP32929 405 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 MAGEA11P43364 429 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 MLLT6P55198 1093 aaPredicted RBP12.67□□□□□ -0.38
SRSF4-204ENST00000489898 RBP5P82980 135 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 SMARCB1Q12824 385 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 MTAPQ13126 283 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 CCINQ13939 588 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 ZNF77Q15935 545 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 DDR2Q16832 855 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 KNOP1Q1ED39 458 aaKnown RBP12.67□□□□□ -0.38
SRSF4-204ENST00000489898 PKN3Q6P5Z2 889 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 PARD3BQ8TEW8 1205 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
SRSF4-204ENST00000489898 TTLL2Q9BWV7 592 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 IRF2BPLQ9H1B7 796 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 BRD9Q9H8M2 597 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 HMGXB4Q9UGU5 601 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
SRSF4-204ENST00000489898 FRYQ5TBA9 3013 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 SLC38A8A6NNN8 435 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 TACC1O75410 805 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 RHOBTB3O94955 611 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
SRSF4-204ENST00000489898 KRT19P08727 400 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 CDC25CP30307 473 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
SRSF4-204ENST00000489898 MYL6P60660 151 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 SNRPFP62306 86 aaKnown RBP12.66□□□□□ -0.38
SRSF4-204ENST00000489898 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
SRSF4-204ENST00000489898 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 TXNDC8Q6A555 127 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 TSSK4Q6SA08 328 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 DPH6Q7L8W6 267 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 ITIH5Q86UX2 942 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 IRF7Q92985 503 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 SHDQ96IW2 340 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 ANKRD36BP1Q96IX9 119 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 LRRC27Q9C0I9 530 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 ATXN3LQ9H3M9 355 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 RBM12Q9NTZ6 932 aaKnown RBP12.66□□□□□ -0.38
SRSF4-204ENST00000489898 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
SRSF4-204ENST00000489898 MYO18AQ92614 2054 aaKnown RBP12.66□□□□□ -0.38
SRSF4-204ENST00000489898 ZFHX4Q86UP3 3567 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 A0A1W2PQ27 194 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 A0A1W2PQ64 194 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 A0A1W2PQD8 194 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 ANTXRLA6NF34 631 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 SPECC1L-ADORA2AF8WAN1 911 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 K7ESF4 209 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 HUS1O60921 280 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 DLATP10515 647 aaKnown RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 MAGEA9P43362 315 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 AMPD3Q01432 767 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 TSPY1Q01534 308 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 DMWDQ09019 674 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 ZNF268Q14587 947 aaPredicted RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 NFIL3Q16649 462 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 DUOXA2Q1HG44 320 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 ZACNQ401N2 412 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 METTL23Q86XA0 190 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 DCP1BQ8IZD4 617 aaKnown RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 THEM5Q8N1Q8 247 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 ZMIZ2Q8NF64 920 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 NOC3LQ8WTT2 800 aaKnown RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms