RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 FIZ1Q96SL8 496 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 ST6GALNAC4Q9H4F1 302 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 UPF2Q9HAU5 1272 aaKnown RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 ABCB6Q9NP58 842 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 VPS45Q9NRW7 570 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 DDX43Q9NXZ2 648 aaKnown RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 RBAKQ9NYW8 714 aaPredicted RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 SEL1LQ9UBV2 794 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 AGAP1Q9UPQ3 857 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.17□□□□□ -0.62
CHKB-211ENST00000489453 PCDHGA5Q9Y5G8 931 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 STYXL1Q9Y6J8 313 aa11.17□□□□□ -0.62
CHKB-211ENST00000489453 GCNT3O95395 438 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 APBB3O95704 486 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 LDHAP00338 332 aaKnown RBP11.16□□□□□ -0.62
CHKB-211ENST00000489453 ITGB3P05106 788 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 TMEM191BP0C7N4 346 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 HMGA1P17096 107 aaKnown RBP11.16□□□□□ -0.62
CHKB-211ENST00000489453 GAP43P17677 238 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
CHKB-211ENST00000489453 CYP2F1P24903 491 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 PCSK1P29120 753 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 GBP1P32455 592 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 DDIT3P35638 169 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 MPLP40238 635 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 RAP1GAPP47736 663 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 GALK1P51570 392 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 KCNB1Q14721 858 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
CHKB-211ENST00000489453 INTS6LQ5JSJ4 861 aaKnown RBP11.16□□□□□ -0.62
CHKB-211ENST00000489453 RNF43Q68DV7 783 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 ZNF720Q7Z2F6 126 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 TMEM150AQ86TG1 271 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 BRSK2Q8IWQ3 736 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 ABCA7Q8IZY2 2146 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 TMEM86AQ8N2M4 240 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 CCDC26Q8TAB7 109 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 LEO1Q8WVC0 666 aaPredicted RBP11.16□□□□□ -0.62
CHKB-211ENST00000489453 OSCP1Q8WVF1 389 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 CD101Q93033 1021 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 CHFRQ96EP1 664 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 ACBD6Q9BR61 282 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 TMEM206Q9H813 350 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 TMLHEQ9NVH6 421 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 TBC1D7Q9P0N9 293 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 STK17AQ9UEE5 414 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 ITGA11Q9UKX5 1188 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 MYOFQ9NZM1 2061 aa11.16□□□□□ -0.62
CHKB-211ENST00000489453 CEP192Q8TEP8 1941 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 VPS37CA5D8V6 355 aaPredicted RBP11.15□□□□□ -0.62
CHKB-211ENST00000489453 OTOL1A6NHN0 477 aaPredicted RBP11.15□□□□□ -0.62
CHKB-211ENST00000489453 NOL4O94818 638 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 GJA4P35212 333 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 LHX1P48742 406 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 PDE6CP51160 858 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 DGKEP52429 567 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 RBP5P82980 135 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 CREB5Q02930 508 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 GRIN1Q05586 938 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 ALCAMQ13740 583 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 DMC1Q14565 340 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 L1TD1Q5T7N2 865 aaKnown RBP11.15□□□□□ -0.62
CHKB-211ENST00000489453 RRAGBQ5VZM2 374 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
CHKB-211ENST00000489453 C4orf50Q6ZRC1 276 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 SV2BQ7L1I2 683 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 CSGALNACT2Q8N6G5 542 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 LRRC52Q8N7C0 313 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 TRMT2BQ96GJ1 504 aaKnown RBP11.15□□□□□ -0.62
CHKB-211ENST00000489453 ZC3H10Q96K80 434 aaKnown RBP11.15□□□□□ -0.62
CHKB-211ENST00000489453 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 ECT2Q9H8V3 914 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 PCDHB13Q9Y5F0 798 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 SNX9Q9Y5X1 595 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
CHKB-211ENST00000489453 PI4KAP42356 2102 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 NFATC1O95644 943 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 TNNC2P02585 160 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 IDEP14735 1019 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 GARTP22102 1010 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 ANXA13P27216 316 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 ADSSP30520 456 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 MYO1EQ12965 1108 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 USP4Q13107 963 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 ZNF77Q15935 545 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 PLK5Q496M5 336 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 N4BP2L1Q5TBK1 243 aaPredicted RBP11.14□□□□□ -0.63
CHKB-211ENST00000489453 SYT13Q7L8C5 426 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 C11orf74Q86VG3 221 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 TTC30AQ86WT1 665 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 TOP6BLQ8N6T0 577 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 ARL14EPQ8N8R7 260 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms