RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 ARHGAP29Q52LW3 1261 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 SDHAF4Q5VUM1 108 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TDRD10Q5VZ19 366 aaKnown RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 C1orf228Q6PIY5 440 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 OSTM1Q86WC4 334 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TMC8Q8IU68 726 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 ARID3BQ8IVW6 561 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 CELF5Q8N6W0 485 aaKnown RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 MAB21L3Q8N8X9 362 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PJA1Q8NG27 643 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 MYCBPAPQ8TBZ2 947 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PARD3BQ8TEW8 1205 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TAF4BQ92750 862 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 EXOC4Q96A65 974 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 MRPL45Q9BRJ2 306 aaKnown RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 FOXQ1Q9C009 403 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 ELOVL4Q9GZR5 314 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 KCTD10Q9H3F6 313 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TRPV4Q9HBA0 871 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 ZNF334Q9HCZ1 680 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 HEBP1Q9NRV9 189 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TMLHEQ9NVH6 421 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 SPATA6Q9NWH7 488 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 TRAF3IP3Q9Y228 551 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PIAS3Q9Y6X2 628 aa9.74□□□□□ -0.85
HDAC6-232ENST00000489053 MTCL1Q9Y4B5 1905 aaKnown RBP9.74□□□□□ -0.85
HDAC6-232ENST00000489053 PDCD11Q14690 1871 aaKnown RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 TRAV19A0A0A6YYK7 116 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 MYBPHLA2RUH7 354 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 GABRDO14764 452 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 PSMA7O14818 248 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 MAPK13O15264 365 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 CHADO15335 359 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 LAMTOR5O43504 91 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 PI15O43692 258 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 STAU1O95793 577 aaKnown RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 ABL1P00519 1130 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 NPR3P17342 541 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 PTPN1P18031 435 aaKnown RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 LMO2P25791 158 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 MAGEA9P43362 315 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 NLRP12P59046 1061 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 STARD6P59095 220 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 AMPD2Q01433 879 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 IFRD2Q12894 506 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 ANGPT1Q15389 498 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 DCAF17Q5H9S7 520 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 STXBP5Q5T5C0 1151 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 TCERG1LQ5VWI1 586 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 ZC3H14Q6PJT7 736 aaKnown RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 VITQ6UXI7 678 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 DENND5BQ6ZUT9 1274 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 GAREM2Q75VX8 874 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 GPIHBP1Q8IV16 184 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 SMYD4Q8IYR2 804 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 CMTM8Q8IZV2 173 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 FMR1NBQ8N0W7 255 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 CXorf38Q8TB03 319 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 MSANTD3Q96H12 275 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 GSDMAQ96QA5 445 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 PLA2G2FQ9BZM2 168 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 NACA2Q9H009 215 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 SMYD3Q9H7B4 428 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 KIF9Q9HAQ2 790 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 FAM86C1Q9NVL1 165 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 TRPM5Q9NZQ8 1165 aa9.73□□□□□ -0.85
HDAC6-232ENST00000489053 NDRG2Q9UN36 371 aaKnown RBP9.73□□□□□ -0.85
HDAC6-232ENST00000489053 MYO10Q9HD67 2058 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 HCRTO43612 131 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 ATP2C2O75185 946 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 MOSPD3O75425 235 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 HLA-DRAP01903 254 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 USP17L7P0C7H9 530 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 CD72P21854 359 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 FCARP24071 287 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 PPP1R2P41236 205 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 GCLMP48507 274 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 GPR15P49685 360 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 MRE11P49959 708 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 TCF15Q12870 199 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 LRRC32Q14392 662 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 EDRF1Q3B7T1 1238 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 ZNF658Q5TYW1 1059 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-232ENST00000489053 FAM171BQ6P995 826 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
HDAC6-232ENST00000489053 B3GALNT2Q8NCR0 500 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 BPIFB1Q8TDL5 484 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 FAM3CQ92520 227 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 ZNF516Q92618 1163 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 TRMT2BQ96GJ1 504 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms