RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FAM171BQ6P995 826 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 C4orf50Q6ZRC1 276 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 TMEM150AQ86TG1 271 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 ARID3BQ8IVW6 561 aaPredicted RBP18.97■□□□□ 0.63
ITGB1-215ENST00000488494 SCN4BQ8IWT1 228 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 OR6B3Q8NGW1 331 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 TMC2Q8TDI7 906 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 ATOH1Q92858 354 aaPredicted RBP18.97■□□□□ 0.63
ITGB1-215ENST00000488494 E2F7Q96AV8 911 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 DDX23Q9BUQ8 820 aaKnown RBP18.97■□□□□ 0.63
ITGB1-215ENST00000488494 TASP1Q9H6P5 420 aa18.97■□□□□ 0.63
ITGB1-215ENST00000488494 TICRRQ7Z2Z1 1910 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 VPS13AQ96RL7 3174 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 KANSL1LA0AUZ9 987 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 LRRN2O75325 713 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 VNN1O95497 513 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 CD72P21854 359 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 GNL1P36915 607 aaPredicted RBP18.96■□□□□ 0.63
ITGB1-215ENST00000488494 MAGEA11P43364 429 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 RAP1GAPP47736 663 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 MAPRE1Q15691 268 aaKnown RBP18.96■□□□□ 0.63
ITGB1-215ENST00000488494 ZCWPW2Q504Y3 356 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 MFSD6LQ8IWD5 586 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 YAF2Q8IY57 180 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 ENGASEQ8NFI3 743 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 IRF7Q92985 503 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 ELMO3Q96BJ8 720 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 SMG9Q9H0W8 520 aaKnown RBP18.96■□□□□ 0.63
ITGB1-215ENST00000488494 IRF2BPLQ9H1B7 796 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 DPEP3Q9H4B8 488 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 RMND1Q9NWS8 449 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 OBSL1O75147 1896 aa18.96■□□□□ 0.63
ITGB1-215ENST00000488494 SLC38A8A6NNN8 435 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 DPYSL4O14531 572 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 ZNF263O14978 683 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 TADA3O75528 432 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 AKAP3O75969 853 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 NOL4O94818 638 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 C4BPAP04003 597 aaKnown RBP18.95■□□□□ 0.62
ITGB1-215ENST00000488494 TRIM49P0CI25 452 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 TRIM49CP0CI26 452 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 BDNFP23560 247 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 PIK3CAP42336 1068 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 MRE11P49959 708 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 ANGPT1Q15389 498 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 NFIL3Q16649 462 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 ZACNQ401N2 412 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 ZNF667Q5HYK9 610 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 ALYREFQ86V81 257 aaKnown RBP18.95■□□□□ 0.62
ITGB1-215ENST00000488494 FAM186BQ8IYM0 893 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 MYCBPAPQ8TBZ2 947 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 PCED1BQ96HM7 432 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 VRTNQ9H8Y1 702 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 LTB4R2Q9NPC1 389 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 DLGAP2Q9P1A6 1054 aa18.95■□□□□ 0.62
ITGB1-215ENST00000488494 MAGEC2Q9UBF1 373 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-215ENST00000488494 MTF2Q9Y483 593 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-215ENST00000488494 MIA3Q5JRA6 1907 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 ARNTLO00327 626 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 MAPK13O15264 365 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 F11P03951 625 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 GLULP15104 373 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 RPL13P26373 211 aaKnown RBP18.94■□□□□ 0.62
ITGB1-215ENST00000488494 VAMP7P51809 220 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 FCHO2Q0JRZ9 810 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 C1orf220Q5T0J3 134 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 MRPS31Q92665 395 aaKnown RBP18.94■□□□□ 0.62
ITGB1-215ENST00000488494 ERCC4Q92889 916 aaPredicted RBP18.94■□□□□ 0.62
ITGB1-215ENST00000488494 TRMT2BQ96GJ1 504 aaKnown RBP18.94■□□□□ 0.62
ITGB1-215ENST00000488494 SLC46A2Q9BY10 475 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 UXTQ9UBK9 157 aaPredicted RBP18.94■□□□□ 0.62
ITGB1-215ENST00000488494 PIAS3Q9Y6X2 628 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 PTPRDP23468 1912 aa18.94■□□□□ 0.62
ITGB1-215ENST00000488494 A8MXQ7 604 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 KRT13P13646 458 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 TARSP26639 723 aaKnown RBP18.93■□□□□ 0.62
ITGB1-215ENST00000488494 ANXA13P27216 316 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 GRIK1P39086 918 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 TXNDC8Q6A555 127 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 VSTM1Q6UX27 236 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 ZNF852Q6ZMS4 543 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 INTS8Q75QN2 995 aaKnown RBP18.93■□□□□ 0.62
ITGB1-215ENST00000488494 SV2AQ7L0J3 742 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 CMTM8Q8IZV2 173 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 MAB21L3Q8N8X9 362 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 B3GALNT2Q8NCR0 500 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 ZFYVE19Q96K21 471 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 LRRC3BQ96PB8 259 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 TRPV5Q9NQA5 729 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 OBP2AQ9NY56 170 aa18.93■□□□□ 0.62
ITGB1-215ENST00000488494 SHISA7A6NL88 538 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 FAM170BA6NMN3 283 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 IKBKBO14920 756 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 CHADO15335 359 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 SMC2O95347 1197 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 HLA-DRAP01903 254 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 FAM163BP0C2L3 166 aa18.92■□□□□ 0.62
ITGB1-215ENST00000488494 PTPN1P18031 435 aaKnown RBP18.92■□□□□ 0.62
ITGB1-215ENST00000488494 DDX6P26196 483 aaKnown RBP eCLIP18.92■□□□□ 0.62
ITGB1-215ENST00000488494 WEE1P30291 646 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms