RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SDHAF4Q5VUM1 108 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 SPOPLQ6IQ16 392 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 ITIH5Q86UX2 942 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 TAS1R2Q8TE23 839 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 TAF4BQ92750 862 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 MYLPFQ96A32 169 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 ELSPBP1Q96BH3 223 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 RSPRY1Q96DX4 576 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 PCED1BQ96HM7 432 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 DUSP9Q99956 384 aaKnown RBP15.18■□□□□ 0.02
COL9A2-208ENST00000488463 APOBEC3GQ9HC16 384 aaKnown RBP15.18■□□□□ 0.02
COL9A2-208ENST00000488463 WNT16Q9UBV4 365 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 KIF26AQ9ULI4 1882 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-208ENST00000488463 USP34Q70CQ2 3546 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 CETN3O15182 167 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 SLC16A3O15427 465 aaKnown RBP15.17■□□□□ 0.02
COL9A2-208ENST00000488463 TADA3O75528 432 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 NOL4O94818 638 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 F11P03951 625 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 CFHP08603 1231 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 PTPN1P18031 435 aaKnown RBP15.17■□□□□ 0.02
COL9A2-208ENST00000488463 GABRR2P28476 465 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 GTF2H1P32780 548 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 FKBP3Q00688 224 aaKnown RBP15.17■□□□□ 0.02
COL9A2-208ENST00000488463 ZNF667Q5HYK9 610 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 CWF19L1Q69YN2 538 aaKnown RBP15.17■□□□□ 0.02
COL9A2-208ENST00000488463 TTI2Q6NXR4 508 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 FOXR2Q6PJQ5 311 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 SMARCD2Q92925 531 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 DHTKD1Q96HY7 919 aaPredicted RBP15.17■□□□□ 0.02
COL9A2-208ENST00000488463 MYRFLQ96LU7 910 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 BCO2Q9BYV7 579 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 TMEM8AQ9HCN3 771 aa15.17■□□□□ 0.02
COL9A2-208ENST00000488463 SHISA7A6NL88 538 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 KRT13P13646 458 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 WEE1P30291 646 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 CACNA2D1P54289 1103 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 NLRP12P59046 1061 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 VEPH1Q14D04 833 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 MDH1BQ5I0G3 518 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 SCARA5Q6ZMJ2 495 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 C4orf50Q6ZRC1 276 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 PAQR9Q6ZVX9 377 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 SPATA2LQ8IUW3 424 aaPredicted RBP15.16■□□□□ 0.02
COL9A2-208ENST00000488463 OR6B3Q8NGW1 331 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 ZSCAN18Q8TBC5 510 aaPredicted RBP15.16■□□□□ 0.02
COL9A2-208ENST00000488463 TRMT2BQ96GJ1 504 aaKnown RBP15.16■□□□□ 0.02
COL9A2-208ENST00000488463 LRRC3BQ96PB8 259 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 B3GNT5Q9BYG0 378 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 GPR88Q9GZN0 384 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 SNX25Q9H3E2 840 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 KIAA1468Q9P260 1216 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 HMGXB4Q9UGU5 601 aa15.16■□□□□ 0.02
COL9A2-208ENST00000488463 ZFHX2Q9C0A1 2572 aaPredicted RBP15.16■□□□□ 0.02
COL9A2-208ENST00000488463 SLC38A8A6NNN8 435 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 BIN1O00499 593 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 PSMA7O14818 248 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 FGF19O95750 216 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 CSH1P0DML2 217 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 CSH2P0DML3 217 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
COL9A2-208ENST00000488463 BDNFP23560 247 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 AVPR2P30518 371 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 VIPR2P41587 438 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 PIK3CAP42336 1068 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 RPL10AP62906 217 aaKnown RBP15.15■□□□□ 0.02
COL9A2-208ENST00000488463 CYP4F8P98187 520 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 INCA1Q0VD86 236 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 MAPRE1Q15691 268 aaKnown RBP15.15■□□□□ 0.02
COL9A2-208ENST00000488463 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 VITQ6UXI7 678 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 ALYREFQ86V81 257 aaKnown RBP15.15■□□□□ 0.02
COL9A2-208ENST00000488463 SIX5Q8N196 739 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 TMEM105Q8N8V8 129 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 B3GALNT2Q8NCR0 500 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 FAM200AQ8TCP9 573 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 SLC35C1Q96A29 364 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 SPATA17Q96L03 361 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 MED15Q96RN5 788 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 TSG101Q99816 390 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 ATXN3LQ9H3M9 355 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 ZFP14Q9HCL3 533 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 MAGEC2Q9UBF1 373 aaPredicted RBP15.15■□□□□ 0.02
COL9A2-208ENST00000488463 COQ4Q9Y3A0 265 aa15.15■□□□□ 0.02
COL9A2-208ENST00000488463 FRYLO94915 3013 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 TICRRQ7Z2Z1 1910 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 A8MXQ7 604 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 ARNTLO00327 626 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 PI15O43692 258 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 PRAMEF12O95522 483 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CDC25CP30307 473 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 PPP1R2P41236 205 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 USP46P62068 366 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 NOP14P78316 857 aaKnown RBP15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CAMK4Q16566 473 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
COL9A2-208ENST00000488463 GPR158Q5T848 1215 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms