RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 KRT13P13646 458 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 GDI1P31150 447 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 PSMC2P35998 433 aaKnown RBP21.83■■□□□ 1.09
HDAC4-209ENST00000487617 MAGEA11P43364 429 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 NLRP12P59046 1061 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 ZACNQ401N2 412 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 ZCWPW2Q504Y3 356 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 ZNF667Q5HYK9 610 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 MDH1BQ5I0G3 518 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 INTS8Q75QN2 995 aaKnown RBP21.83■■□□□ 1.09
HDAC4-209ENST00000487617 SV2AQ7L0J3 742 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 MFSD6LQ8IWD5 586 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 FAM186BQ8IYM0 893 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 DNASE1L2Q92874 299 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 ERCC4Q92889 916 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-209ENST00000487617 SMARCE1Q969G3 411 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 FOXQ1Q9C009 403 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 SMYD3Q9H7B4 428 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 SIT1Q9Y3P8 196 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 NME7Q9Y5B8 376 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 PCDHA5Q9Y5H7 936 aa21.83■■□□□ 1.09
HDAC4-209ENST00000487617 NCANO14594 1321 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 SLC38A8A6NNN8 435 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 A8MXQ7 604 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 DPYSL4O14531 572 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 BDNFP23560 247 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 EDRF1Q3B7T1 1238 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 C1orf220Q5T0J3 134 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 ZNF658Q5TYW1 1059 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-209ENST00000487617 SCARA5Q6ZMJ2 495 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 YAF2Q8IY57 180 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 CCDC105Q8IYK2 499 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 MYCBPAPQ8TBZ2 947 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 IRF7Q92985 503 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 ELMO3Q96BJ8 720 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 RSPRY1Q96DX4 576 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 PCED1BQ96HM7 432 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 IRF2BPLQ9H1B7 796 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 DPEP3Q9H4B8 488 aa21.82■■□□□ 1.08
HDAC4-209ENST00000487617 UXTQ9UBK9 157 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-209ENST00000487617 KANSL1LA0AUZ9 987 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 H0Y858 1186 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 ZNF263O14978 683 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 NOL4O94818 638 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 F11P03951 625 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 DCNP07585 359 aaKnown RBP21.81■■□□□ 1.08
HDAC4-209ENST00000487617 TRIM49P0CI25 452 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 TRIM49CP0CI26 452 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 PTPN1P18031 435 aaKnown RBP21.81■■□□□ 1.08
HDAC4-209ENST00000487617 GRIK1P39086 918 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 PIK3CAP42336 1068 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 PRCPP42785 496 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 CDH8P55286 799 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 SGSM1Q2NKQ1 1148 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 VSTM1Q6UX27 236 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 TPRG1Q6ZUI0 275 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 TMEM150AQ86TG1 271 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 DTWD2Q8NBA8 298 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 PJA1Q8NG27 643 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 HEBP1Q9NRV9 189 aa21.81■■□□□ 1.08
HDAC4-209ENST00000487617 KINO60870 393 aaKnown RBP21.8■■□□□ 1.08
HDAC4-209ENST00000487617 HLA-DRAP01903 254 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 P4HA1P13674 534 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 RAP1GAPP47736 663 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 UBXN2BQ14CS0 331 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 SPATA20Q8TB22 786 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 MRPS31Q92665 395 aaKnown RBP21.8■■□□□ 1.08
HDAC4-209ENST00000487617 ATOH1Q92858 354 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-209ENST00000487617 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 TSG101Q99816 390 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 DDX23Q9BUQ8 820 aaKnown RBP21.8■■□□□ 1.08
HDAC4-209ENST00000487617 SLC46A2Q9BY10 475 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 ZMYM5Q9UJ78 669 aa21.8■■□□□ 1.08
HDAC4-209ENST00000487617 CETN3O15182 167 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 GADD45BO75293 160 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-209ENST00000487617 CD72P21854 359 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 DDX6P26196 483 aaKnown RBP eCLIP21.79■■□□□ 1.08
HDAC4-209ENST00000487617 ANXA13P27216 316 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 WEE1P30291 646 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 GCLMP48507 274 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 COBLL1Q53SF7 1204 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 CMTM8Q8IZV2 173 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 MAB21L3Q8N8X9 362 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 B3GALNT2Q8NCR0 500 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 TAF4BQ92750 862 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 TRMT2BQ96GJ1 504 aaKnown RBP21.79■■□□□ 1.08
HDAC4-209ENST00000487617 MYRFLQ96LU7 910 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 GTPBP4Q9BZE4 634 aaKnown RBP21.79■■□□□ 1.08
HDAC4-209ENST00000487617 SDCBP2Q9H190 292 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 MMRN2Q9H8L6 949 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 FAM86C1Q9NVL1 165 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 OBP2AQ9NY56 170 aa21.79■■□□□ 1.08
HDAC4-209ENST00000487617 PRAMEF12O95522 483 aa21.78■■□□□ 1.08
HDAC4-209ENST00000487617 ASS1P00966 412 aaKnown RBP21.78■■□□□ 1.08
HDAC4-209ENST00000487617 ENPEPQ07075 957 aa21.78■■□□□ 1.08
HDAC4-209ENST00000487617 PPP3CAQ08209 521 aa21.78■■□□□ 1.08
HDAC4-209ENST00000487617 TXNDC8Q6A555 127 aa21.78■■□□□ 1.08
HDAC4-209ENST00000487617 SPOPLQ6IQ16 392 aa21.78■■□□□ 1.08
HDAC4-209ENST00000487617 ZNF852Q6ZMS4 543 aa21.78■■□□□ 1.08
HDAC4-209ENST00000487617 ELOA2Q8IYF1 753 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms