RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMARCC1-207ENST00000485833 LRP6O75581 1613 aa5.88□□□□□ -1.47
SMARCC1-207ENST00000485833 F5H697 171 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 M0QYG6 137 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 AKAP10O43572 662 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 TRIAP1O43715 76 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 ALDH2P05091 517 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 CHRM2P08172 466 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 CHRM3P20309 590 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 ITGALP20701 1170 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 GRIA3P42263 894 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 HNRNPMP52272 730 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 EMC10Q5UCC4 262 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 USP37Q86T82 979 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 NTN5Q8WTR8 489 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 C1GALT1C1Q96EU7 318 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 LRFN3Q9BTN0 628 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 RTFDC1Q9BY42 306 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 RSAD1Q9HA92 442 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 SEMA4GQ9NTN9 838 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 ZNF180Q9UJW8 692 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 NPHP4O75161 1426 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 SYCP2Q9BX26 1530 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 INO80Q9ULG1 1556 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 ROBO1Q9Y6N7 1651 aa5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 COL11A2P13942 1736 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-207ENST00000485833 DEPDC5O75140 1603 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 SETBP1Q9Y6X0 1596 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 WDR27A2RRH5 827 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 ADM5C9JUS6 153 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 VPS4BO75351 444 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 RAB27AP51159 221 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 EPHB1P54762 984 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 EXOSC9Q06265 439 aaKnown RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 ZNF267Q14586 743 aaPredicted RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 SYCE2Q6PIF2 218 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 GRASPQ7Z6J2 395 aaPredicted RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 DIS3LQ8TF46 1054 aaKnown RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 JPH3Q8WXH2 748 aaPredicted RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 MTFMTQ96DP5 389 aaKnown RBP5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 AIFM3Q96NN9 605 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 CAMKK2Q96RR4 588 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 CGRRF1Q99675 332 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 KLK15Q9H2R5 256 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 NMRK2Q9NPI5 230 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 RAD54BQ9Y620 910 aa5.86□□□□□ -1.47
SMARCC1-207ENST00000485833 ATP7AQ04656 1500 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 MED14O60244 1454 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 TROQ12816 1431 aaPredicted RBP5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 IGLV2-14P01704 120 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 PIM1P11309 404 aaPredicted RBP5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 CD38P28907 300 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 RBM20Q5T481 1227 aaKnown RBP5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 FAM160B1Q5W0V3 765 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 ARHGEF25Q86VW2 580 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 FAM46DQ8NEK8 389 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 UROC1Q96N76 676 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 TPSD1Q9BZJ3 242 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 CDH19Q9H159 772 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 SARS2Q9NP81 518 aaKnown RBP5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 KLC4Q9NSK0 619 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 ENTPD2Q9Y5L3 495 aa5.85□□□□□ -1.47
SMARCC1-207ENST00000485833 PCSK5Q92824 1860 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 ADGRA2Q96PE1 1338 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 AP1G1O43747 822 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 C1QL1O75973 258 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 C1RP00736 705 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 RHOP08100 348 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 HSPA6P17066 643 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 HDCP19113 662 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 CD6P30203 668 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 GCLCP48506 637 aaPredicted RBP5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 SOX8P57073 446 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 FAM109AQ8N4B1 249 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 KLHDC4Q8TBB5 520 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 PBKQ96KB5 322 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 ALG8Q9BVK2 526 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 SPATA5L1Q9BVQ7 753 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 ACTRT3Q9BYD9 372 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 AMBRA1Q9C0C7 1298 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 ASB6Q9NWX5 421 aa5.84□□□□□ -1.47
SMARCC1-207ENST00000485833 A2MP01023 1474 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 TNRQ92752 1358 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 ADGBQ8N7X0 1667 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 H3BML4 177 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 MASP2O00187 686 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 RFPL1O75677 317 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 DNAJB5O75953 348 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 RAB1AP62820 205 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 BOP1Q14137 746 aaKnown RBP5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 CCDC142Q17RM4 750 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 KHDC1LQ5JSQ8 128 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 AKNAD1Q5T1N1 836 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 GGT6Q6P531 493 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 DENND1CQ8IV53 801 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 CAMKK1Q8N5S9 505 aa5.83□□□□□ -1.48
SMARCC1-207ENST00000485833 PLBD2Q8NHP8 589 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms