RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 UNC5CO95185 931 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 TOP3BO95985 862 aaKnown RBP10.64□□□□□ -0.71
COL12A1-207ENST00000483888 KLK7P49862 253 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 USP11P51784 963 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 DGCR6Q14129 220 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 EZH2Q15910 746 aaKnown RBP10.64□□□□□ -0.71
COL12A1-207ENST00000483888 PGBD2Q6P3X8 592 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 ELOA2Q8IYF1 753 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-207ENST00000483888 ZSCAN18Q8TBC5 510 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-207ENST00000483888 SGF29Q96ES7 293 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 MXD3Q9BW11 206 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 TBC1D10AQ9BXI6 508 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 MAGEB5Q9BZ81 275 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 ARMCX1Q9P291 453 aa10.64□□□□□ -0.71
COL12A1-207ENST00000483888 C21orf2O43822 256 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 IFNAR1P17181 557 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 SEL1L3Q68CR1 1132 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 SHCBP1Q8NEM2 672 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 C18orf8Q96DM3 657 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 RBBP8Q99708 897 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 EGFL8Q99944 293 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 NUP50Q9UKX7 468 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 C5orf58C9J3I9 102 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 RHAGQ02094 409 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ARL13BQ3SXY8 428 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 SPDYE7PQ495Y7 208 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 PAPD7Q5XG87 772 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 OR8H1Q8NGG4 311 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ACEP12821 1306 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 TESPA1A2RU30 521 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 E9PBE3 544 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 WARSP23381 471 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 COILP38432 576 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 PURAQ00577 322 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 CARTPTQ16568 116 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 KRT77Q7Z794 578 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 RCOR2Q8IZ40 523 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 TUBGCP5Q96RT8 1024 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 WHRNQ9P202 907 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 SNX8Q9Y5X2 465 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 FAM92AA1XBS5 289 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 TRMUO75648 421 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 GLI1P08151 1106 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 VAC14Q08AM6 782 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 GCKRQ14397 625 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ZC2HC1CQ53FD0 456 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 AVENQ9NQS1 362 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 APOL1O14791 398 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 HK2P52789 917 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 PKN2Q16513 984 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 C5orf22Q49AR2 442 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 TTC30AQ86WT1 665 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 PIH1D3Q9NQM4 214 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 MTSS1O43312 755 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ZNF12P17014 697 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 OCLNQ16625 522 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 PYDC2Q56P42 97 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 TOR3AQ9H497 397 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 CUEDC1Q9NWM3 386 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 A0A1W2PP64 1363 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 TFECO14948 347 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 MRPS22P82650 360 aaKnown RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 GRSF1Q12849 480 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 REREQ9P2R6 1566 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 BGNP21810 368 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 SLC9A3P48764 834 aa10.63□□□□□ -0.71
COL12A1-207ENST00000483888 MXD4Q14582 209 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 KCTD14Q9BQ13 255 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-207ENST00000483888 SYNMO15061 1565 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 MROH5Q6ZUA9 1318 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 PLOD3O60568 738 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 PCP11498 1178 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 COASYQ13057 564 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 TSNQ15631 228 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ARHGEF16Q5VV41 709 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 BROXQ5VW32 411 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ANKRD40Q6AI12 368 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 SCARA3Q6AZY7 606 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 DHRSXQ8N5I4 330 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 C7orf31Q8N865 590 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 TAMM41Q96BW9 452 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ARHGEF26Q96DR7 871 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 CLRN2A0PK11 232 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 USP12O75317 370 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 C11orf74Q86VG3 221 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 MAPKAPK5Q8IW41 473 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 LRRC47Q8N1G4 583 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 C14orf93Q9H972 538 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 BFARQ9NZS9 450 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 VAV3Q9UKW4 847 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 HEATR9A2RTY3 570 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms