RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ZNF48Q96MX3 618 aaPredicted RBP4□□□□□ -1.77
LAPTM4A-202ENST00000483117 BHMT2Q9H2M3 363 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 DUSP22Q9NRW4 184 aa4□□□□□ -1.77
LAPTM4A-202ENST00000483117 PRRT4C9JH25 899 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 H3BUI4 141 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 SNUPNO95149 360 aaKnown RBP3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 UNC5CO95185 931 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 SFPQP23246 707 aaKnown RBP eCLIP3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 PDE1AP54750 535 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 LOXL3P58215 753 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 PLS1Q14651 629 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 CCDC157Q569K6 752 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 MORN5Q5VZ52 161 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 LAYNQ6UX15 382 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 ZNF804AQ7Z570 1209 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 WDR53Q7Z5U6 358 aaPredicted RBP3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 LRRC71Q8N4P6 559 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 CELF5Q8N6W0 485 aaKnown RBP3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 BRIX1Q8TDN6 353 aaKnown RBP3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 FCRL4Q96PJ5 515 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 GTPBP4Q9BZE4 634 aaKnown RBP3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 PCDHA6Q9UN73 950 aa3.99□□□□□ -1.77
LAPTM4A-202ENST00000483117 ZNF521Q96K83 1311 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 IL33O95760 270 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 TUBB4AP04350 444 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 IGKV2-30P06310 120 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 ATXN1LP0C7T5 689 aaKnown RBP3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 PTGER1P34995 402 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 PXNP49023 591 aaPredicted RBP3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 SOX8P57073 446 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 NKX6-1P78426 367 aaPredicted RBP3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 IQCB1Q15051 598 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 PGS1Q32NB8 556 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC9A4Q6AI14 798 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 RGS7BPQ6MZT1 257 aaPredicted RBP3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 CHSY1Q86X52 802 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 PNLDC1Q8NA58 520 aaKnown RBP3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 CYP2W1Q8TAV3 490 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 DENND1AQ8TEH3 1009 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 GLG1Q92896 1179 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 R3HDM4Q96D70 268 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 SLC35A4Q96G79 324 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 FAM167AQ96KS9 214 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 CAMKK2Q96RR4 588 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 PTDSS2Q9BVG9 487 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 SPRTNQ9H040 489 aaPredicted RBP3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 GLOD4Q9HC38 313 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 ADAMTS5Q9UNA0 930 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 SPEF1Q9Y4P9 236 aa3.98□□□□□ -1.77
LAPTM4A-202ENST00000483117 A1L4Q6 167 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 hCG_1984214I3L0E3 225 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 MYO1FO00160 1098 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 MOSPD3O75425 235 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 BMP15O95972 392 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 PPIFP30405 207 aaKnown RBP3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 KCNJ5P48544 419 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 HOXA4Q00056 320 aaPredicted RBP3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 MAPK7Q13164 816 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 TMEM240Q5SV17 173 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 CATSPERGQ6ZRH7 1159 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 XAGE5Q8WWM1 108 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 HSPBAP1Q96EW2 488 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 C5orf34Q96MH7 638 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 FSD1LQ9BXM9 530 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 PDGFCQ9NRA1 345 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 CCNL1Q9UK58 526 aaPredicted RBP3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 NDRG4Q9ULP0 352 aaKnown RBP3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 SH2B3Q9UQQ2 575 aa3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 MRPS17Q9Y2R5 130 aaKnown RBP3.97□□□□□ -1.77
LAPTM4A-202ENST00000483117 SMIM35A0A1B0GVV1 85 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 KCNU1A8MYU2 1149 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 ADAMTS3O15072 1205 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 EIF5BO60841 1220 aaKnown RBP3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 PDE8BO95263 885 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 TOP3BO95985 862 aaKnown RBP3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 GRPP07492 148 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 CTGFP29279 349 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 ARHGAP25P42331 645 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 E2F2Q14209 437 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 AMOTQ4VCS5 1084 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 KHDC1LQ5JSQ8 128 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 EMC10Q5UCC4 262 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 TRIM72Q6ZMU5 477 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 PARS2Q7L3T8 475 aaKnown RBP3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 CNGA4Q8IV77 575 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 FAM177A1Q8N128 213 aaPredicted RBP3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 MVB12AQ96EY5 273 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 ARMT1Q9H993 441 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 TBC1D30Q9Y2I9 924 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 LUC7L2Q9Y383 392 aaKnown RBP3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 PLEKHM1Q9Y4G2 1056 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 CADPSQ9ULU8 1353 aa3.96□□□□□ -1.78
LAPTM4A-202ENST00000483117 ERC2O15083 957 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 ALDH2P05091 517 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 NPSP0C0P6 89 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 DEPDC1Q5TB30 811 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 FCRL6Q6DN72 434 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 Q6ZWC4 215 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 ZNF280BQ86YH2 543 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 C8orf58Q8NAV2 365 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms