RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 A8MXQ7 604 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 RPL13P26373 211 aaKnown RBP25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 DLG4P78352 724 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 CLDN10P78369 228 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 MDH1BQ5I0G3 518 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 FAM171BQ6P995 826 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 ALYREFQ86V81 257 aaKnown RBP25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 GPIHBP1Q8IV16 184 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 MFSD6LQ8IWD5 586 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 SMYD4Q8IYR2 804 aaPredicted RBP25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 MRPS31Q92665 395 aaKnown RBP25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 MKNK1Q9BUB5 465 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 ZMYM5Q9UJ78 669 aa25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 HOOK1Q9UJC3 728 aaKnown RBP25.13■■□□□ 1.61
RHBDF1-208ENST00000482904 SMC2O95347 1197 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 KRT13P13646 458 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 HMGA1P17096 107 aaKnown RBP25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 CD72P21854 359 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 ANXA13P27216 316 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 HOXD11P31277 338 aaPredicted RBP25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 PIK3CAP42336 1068 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 MAGEA11P43364 429 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 NLRP12P59046 1061 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 NFIL3Q16649 462 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 FAM186BQ8IYM0 893 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 RSPRY1Q96DX4 576 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 SMYD3Q9H7B4 428 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 LTB4R2Q9NPC1 389 aa25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 MRPS17Q9Y2R5 130 aaKnown RBP25.12■■□□□ 1.61
RHBDF1-208ENST00000482904 COL4A3Q01955 1670 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 SLC38A8A6NNN8 435 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 NOL4O94818 638 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 PRAMEF12O95522 483 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 C4BPAP04003 597 aaKnown RBP25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 P4HA1P13674 534 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 BDNFP23560 247 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 AVPR1AP37288 418 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 GRIK1P39086 918 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 MRE11P49959 708 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 VAMP7P51809 220 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 VSTM1Q6UX27 236 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 ZNF852Q6ZMS4 543 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 INTS8Q75QN2 995 aaKnown RBP25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 MYCBPAPQ8TBZ2 947 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 CSGALNACT1Q8TDX6 532 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 PCED1BQ96HM7 432 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 PHOX2BQ99453 314 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 DDX23Q9BUQ8 820 aaKnown RBP25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 VRTNQ9H8Y1 702 aa25.11■■□□□ 1.61
RHBDF1-208ENST00000482904 MAPK13O15264 365 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 AKAP3O75969 853 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 FAM163BP0C2L3 166 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 DDX6P26196 483 aaKnown RBP eCLIP25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 RAP1GAPP47736 663 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 ADAM9Q13443 819 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 ANGPT1Q15389 498 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 ZACNQ401N2 412 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 SMARCE1Q969G3 411 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 TRMT2BQ96GJ1 504 aaKnown RBP25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 BCO2Q9BYV7 579 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 IMPG2Q9BZV3 1241 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 SMG9Q9H0W8 520 aaKnown RBP25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 DPEP3Q9H4B8 488 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 PIAS3Q9Y6X2 628 aa25.1■■□□□ 1.61
RHBDF1-208ENST00000482904 FAM170BA6NMN3 283 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 IKBKBO14920 756 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 LRRN2O75325 713 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 VNN1O95497 513 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 TRIM49P0CI25 452 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 TRIM49CP0CI26 452 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 PSMC2P35998 433 aaKnown RBP25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 SV2AQ7L0J3 742 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 CMTM8Q8IZV2 173 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 MAB21L3Q8N8X9 362 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 B3GALNT2Q8NCR0 500 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 ENGASEQ8NFI3 743 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 ELMO3Q96BJ8 720 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 GSDMAQ96QA5 445 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 SLC46A2Q9BY10 475 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 MMRN2Q9H8L6 949 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 TRPC7Q9HCX4 862 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 OBP2AQ9NY56 170 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 NME7Q9Y5B8 376 aa25.09■■□□□ 1.61
RHBDF1-208ENST00000482904 MAN2B1O00754 1011 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 TRIM66O15016 1216 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 CHADO15335 359 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 KINO60870 393 aaKnown RBP25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 F11P03951 625 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 PTPN1P18031 435 aaKnown RBP25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 FCHO2Q0JRZ9 810 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 SGSM1Q2NKQ1 1148 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 EDRF1Q3B7T1 1238 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 TXNDC8Q6A555 127 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 TMEM150AQ86TG1 271 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 BPIFB1Q8TDL5 484 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 TSG101Q99816 390 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 OSBPL6Q9BZF3 934 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 ELOVL4Q9GZR5 314 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 TRPV5Q9NQA5 729 aa25.08■■□□□ 1.61
RHBDF1-208ENST00000482904 NDRG2Q9UN36 371 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms