RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	BTBD6	Q96KE9	485 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM175	Q9BSA9	504 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CWH43	Q9H720	699 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	AVEN	Q9NQS1	362 aa	Predicted RBP	11.87	□□□□□ -0.51
APTX-223	ENST00000479656	ST7	Q9NRC1	585 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	MARCH5	Q9NX47	278 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	ADAM28	Q9UKQ2	775 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	CDH9	Q9ULB4	789 aa		11.87	□□□□□ -0.51
APTX-223	ENST00000479656	ARHGEF37	A1IGU5	675 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PIK3R2	O00459	728 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	NCK2	O43639	380 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	GJB6	O95452	261 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	TYMP	P19971	482 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PCSK1	P29120	753 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	RGS7	P49802	495 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	HADHB	P55084	474 aa	Known RBP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	YWHAH	Q04917	246 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	FPGS	Q05932	587 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PDE4C	Q08493	712 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PDCL	Q13371	301 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PPIG	Q13427	754 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	MAMLD1	Q13495	774 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PLEKHA7	Q6IQ23	1121 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PMF1	Q6P1K2	205 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PAQR9	Q6ZVX9	377 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	SLFN11	Q7Z7L1	901 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	CEP57	Q86XR8	500 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	FUK	Q8N0W3	1084 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	THEM5	Q8N1Q8	247 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	SPATA18	Q8TC71	538 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	SLC35F5	Q8WV83	523 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	ZNF689	Q96CS4	500 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	C18orf8	Q96DM3	657 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM209	Q96SK2	561 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	HNRNPAB	Q99729	332 aa	Known RBP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	ACBD6	Q9BR61	282 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	B3GNT5	Q9BYG0	378 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	GPR62	Q9BZJ7	368 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	UVRAG	Q9P2Y5	699 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	HYOU1	Q9Y4L1	999 aa		11.86	□□□□□ -0.51
APTX-223	ENST00000479656	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-223	ENST00000479656	MYH10	P35580	1976 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM110-MUSTN1	A8MSY1	372 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	ZBBX	A8MT70	800 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	MTA2	O94776	668 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	BAIAP3	O94812	1187 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	ERBB2	P04626	1255 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	ALDH7A1	P49419	539 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	EPHB4	P54760	987 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	MESD	Q14696	234 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	MEI1	Q5TIA1	1274 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	FAM171A1	Q5VUB5	890 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	PAPD7	Q5XG87	772 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM173	Q86WV6	379 aa	Predicted RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	OR10T2	Q8NGX3	314 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	MYCBPAP	Q8TBZ2	947 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	PCED1B	Q96HM7	432 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	MED10	Q9BTT4	135 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	TLR10	Q9BXR5	811 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	TRIM7	Q9C029	511 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	SYNC	Q9H7C4	482 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	MRPL47	Q9HD33	250 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	PARVA	Q9NVD7	372 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	TCRBV5S1A1T	A0A578	114 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	GOLGA8S	H3BPF8	625 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	SRGAP2	O75044	1071 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	GABRB2	P47870	512 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	BST2	Q10589	180 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	INTS6L	Q5JSJ4	861 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	SPOUT1	Q5T280	376 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	FUT10	Q6P4F1	479 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	PEX26	Q7Z412	305 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	LRRTM3	Q86VH5	581 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	XYLT1	Q86Y38	959 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	SYCE1	Q8N0S2	351 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	FEZF2	Q8TBJ5	459 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	CALR3	Q96L12	384 aa	Known RBP	11.85	□□□□□ -0.51
APTX-223	ENST00000479656	B3GALT6	Q96L58	329 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	ABCB6	Q9NP58	842 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	ANAPC7	Q9UJX3	599 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	STRIP2	Q9ULQ0	834 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	ALG6	Q9Y672	507 aa		11.85	□□□□□ -0.51
APTX-223	ENST00000479656	LTBP2	Q14767	1821 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	ALPK3	Q96L96	1907 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656		E5RJQ4	531 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	RIOK3	O14730	519 aa	Known RBP	11.84	□□□□□ -0.51
APTX-223	ENST00000479656	SYN3	O14994	580 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	GABBR2	O75899	941 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	BEST1	O76090	585 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	OAZ2	O95190	189 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	SETSIP	P0DME0	302 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	DNA2	P51530	1060 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	BCAT1	P54687	386 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	RPL7A	P62424	266 aa	Known RBP	11.84	□□□□□ -0.51
APTX-223	ENST00000479656	AMPD2	Q01433	879 aa		11.84	□□□□□ -0.51
APTX-223	ENST00000479656	BTG3	Q14201	252 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-223	ENST00000479656	ZNF268	Q14587	947 aa	Predicted RBP	11.84	□□□□□ -0.51
APTX-223	ENST00000479656	TMEM240	Q5SV17	173 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms