RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 KXD1Q9BQD3 176 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 APOBEC3GQ9HC16 384 aaKnown RBP16.64■□□□□ 0.25
HMGA1-206ENST00000478214 MAGEC2Q9UBF1 373 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-206ENST00000478214 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-206ENST00000478214 DUSP12Q9UNI6 340 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 BICDL2A1A5D9 508 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 STX10O60499 249 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 HMGA1P17096 107 aaKnown RBP16.63■□□□□ 0.25
HMGA1-206ENST00000478214 BDNFP23560 247 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 GABRR2P28476 465 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 ASPAP45381 313 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
HMGA1-206ENST00000478214 NOP14P78316 857 aaKnown RBP16.63■□□□□ 0.25
HMGA1-206ENST00000478214 CYP27A1Q02318 531 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 MAPRE1Q15691 268 aaKnown RBP16.63■□□□□ 0.25
HMGA1-206ENST00000478214 TAF12Q16514 161 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 FAM78AQ5JUQ0 283 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 FOXR2Q6PJQ5 311 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 SEMA4DQ92854 862 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 IL21Q9HBE4 155 aa16.63■□□□□ 0.25
HMGA1-206ENST00000478214 MAGEA11P43364 429 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 CCDC40Q4G0X9 1142 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 STXBP5Q5T5C0 1151 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 TANGO2Q6ICL3 276 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 FRMD5Q7Z6J6 570 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 FBXL13Q8NEE6 735 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 PBXIP1Q96AQ6 731 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 ASB16Q96NS5 453 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 NIF3L1Q9GZT8 377 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 SLITRK6Q9H5Y7 841 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 METTL14Q9HCE5 456 aaKnown RBP16.62■□□□□ 0.25
HMGA1-206ENST00000478214 HMGXB4Q9UGU5 601 aa16.62■□□□□ 0.25
HMGA1-206ENST00000478214 MAGED2Q9UNF1 606 aaPredicted RBP16.62■□□□□ 0.25
HMGA1-206ENST00000478214 CLDN5O00501 218 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 FGF19O95750 216 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 PDGFBP01127 241 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-206ENST00000478214 CFHP08603 1231 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 CSH1P0DML2 217 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 CSH2P0DML3 217 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 SRFP11831 508 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 FCARP24071 287 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 NDST1P52848 882 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 CYP4F8P98187 520 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 ORC1Q13415 861 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 VSTM1Q6UX27 236 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 BMP8AQ7Z5Y6 402 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 ACOT1Q86TX2 421 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 CCDC150Q8NCX0 1101 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 ZSCAN18Q8TBC5 510 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-206ENST00000478214 GPT2Q8TD30 523 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 B3GNT5Q9BYG0 378 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 BCO2Q9BYV7 579 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 PLA2G2FQ9BZM2 168 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 ZNF518BQ9C0D4 1074 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 RAB20Q9NX57 234 aa16.61■□□□□ 0.25
HMGA1-206ENST00000478214 SLC38A8A6NNN8 435 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 ECI2O75521 394 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 NOL4O94818 638 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 CDC25CP30307 473 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 GRIK1P39086 918 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 VIPR2P41587 438 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 CACNA2D1P54289 1103 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 TMEM150AQ86TG1 271 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 SMARCD2Q92925 531 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 TNIP3Q96KP6 325 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 GCNAQ96QF7 691 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 MED15Q96RN5 788 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
HMGA1-206ENST00000478214 GPR88Q9GZN0 384 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 CYP3A43Q9HB55 503 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 TMEM30AQ9NV96 361 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
HMGA1-206ENST00000478214 F8VP50 259 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 F11P03951 625 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 CD58P19256 250 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 NLRP12P59046 1061 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 GPC5P78333 572 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 INCA1Q0VD86 236 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 ARHGAP15Q53QZ3 475 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 GPR158Q5T848 1215 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 UNC93AQ86WB7 457 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 GPIHBP1Q8IV16 184 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 CRYBG2Q8N1P7 616 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 MLKLQ8NB16 471 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 TATDN2Q93075 761 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 ELSPBP1Q96BH3 223 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 TWNKQ96RR1 684 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 ELOVL4Q9GZR5 314 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 TRPV4Q9HBA0 871 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 ZFP14Q9HCL3 533 aa16.59■□□□□ 0.25
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