RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 GDAP2Q9NXN4 497 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 PCDHGA5Q9Y5G8 931 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 DENND4CQ5VZ89 1909 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 RALGAPA1Q6GYQ0 2036 aa11.64□□□□□ -0.55
CDRT1-205ENST00000475944 OBSL1O75147 1896 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 TRAV19A0A0A6YYK7 116 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 VPS37CA5D8V6 355 aaPredicted RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 MYMKA6NI61 221 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 TADA3O75528 432 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 CKMP06732 381 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 KRT19P08727 400 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 USP17L7P0C7H9 530 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 TMEM191BP0C7N4 346 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 PDCP20941 246 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 ACAT1P24752 427 aaKnown RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 CYP2F1P24903 491 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 GJA4P35212 333 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 IFNAR2P48551 515 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 LHX1P48742 406 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 WNT7BP56706 349 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 KCNA1Q09470 495 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 SF3A2Q15428 464 aaKnown RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 CFAP221Q4G0U5 840 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 SDHAF4Q5VUM1 108 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 USP49Q70CQ1 688 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 KBTBD6Q86V97 674 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 SPATA2LQ8IUW3 424 aaPredicted RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 ADGRF2Q8IZF7 708 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 CSGALNACT2Q8N6G5 542 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 RIN3Q8TB24 985 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 OSCP1Q8WVF1 389 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 ATP2A3Q93084 1043 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 ACDQ96AP0 544 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 DNAJC19Q96DA6 116 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 FUBP3Q96I24 572 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 ZC3H10Q96K80 434 aaKnown RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 MYRFLQ96LU7 910 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 DUS2Q9NX74 493 aaKnown RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 TBC1D7Q9P0N9 293 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 GTF3C4Q9UKN8 822 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 SRPRBQ9Y5M8 271 aaKnown RBP11.63□□□□□ -0.55
CDRT1-205ENST00000475944 SNX9Q9Y5X1 595 aa11.63□□□□□ -0.55
CDRT1-205ENST00000475944 GREB1Q4ZG55 1949 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 ZNF638Q14966 1978 aaKnown RBP11.62□□□□□ -0.55
CDRT1-205ENST00000475944 IDEP14735 1019 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 PDE6CP51160 858 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 GALK1P51570 392 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 RBP5P82980 135 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 USP4Q13107 963 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 NR1H3Q13133 447 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 KCNB1Q14721 858 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 ELF2Q15723 593 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 ZNF77Q15935 545 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 CCDC6Q16204 474 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 C4orf50Q6ZRC1 276 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 CCDC73Q6ZRK6 1079 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 SYT13Q7L8C5 426 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 DPH6Q7L8W6 267 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 SCN4BQ8IWT1 228 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 TOP6BLQ8N6T0 577 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 TTC16Q8NEE8 873 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 RPLP0P6Q8NHW5 317 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 CCDC26Q8TAB7 109 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
CDRT1-205ENST00000475944 CD101Q93033 1021 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 ANKRD36BP1Q96IX9 119 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 CHAMP1Q96JM3 812 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 HHIPQ96QV1 700 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 MTMR12Q9C0I1 747 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 FBRSL1Q9HCM7 1045 aaKnown RBP11.62□□□□□ -0.55
CDRT1-205ENST00000475944 FBXO2Q9UK22 296 aaPredicted RBP11.62□□□□□ -0.55
CDRT1-205ENST00000475944 CLIC4Q9Y696 253 aa11.62□□□□□ -0.55
CDRT1-205ENST00000475944 GOLGA8IPA6NC78 632 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 GOLGA8JA6NMD2 632 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 GABRDO14764 452 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 KIAA0391O15091 583 aaKnown RBP11.61□□□□□ -0.55
CDRT1-205ENST00000475944 KRT37O76014 449 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 APBB3O95704 486 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 MPLP40238 635 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 STAT6P42226 847 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 MAGEA11P43364 429 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 CASP5P51878 434 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 MYO1EQ12965 1108 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 MAPRE1Q15691 268 aaKnown RBP11.61□□□□□ -0.55
CDRT1-205ENST00000475944 ST3GAL2Q16842 350 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 SOWAHAQ2M3V2 549 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 PLK5Q496M5 336 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 PLA2G2CQ5R387 149 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 STXBP4Q6ZWJ1 553 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 OSTM1Q86WC4 334 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 GPD1LQ8N335 351 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 ZSWIM2Q8NEG5 633 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 CXorf38Q8TB03 319 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 CEP295NLQ96MC4 621 aa11.61□□□□□ -0.55
CDRT1-205ENST00000475944 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms