RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 C22orf23Q9BZE7 217 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 PRDM11Q9NQV5 511 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 ZSCAN32Q9NX65 697 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 OBP2AQ9NY56 170 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 FRMPD2Q68DX3 1309 aaPredicted RBP7.93□□□□□ -1.14
SMC5-203ENST00000475540 A0A087WWL8 130 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 MGST3O14880 152 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 TTLL1O95922 423 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 ZFXP17010 805 aaPredicted RBP7.92□□□□□ -1.14
SMC5-203ENST00000475540 PPIFP30405 207 aaKnown RBP7.92□□□□□ -1.14
SMC5-203ENST00000475540 PTH2RP49190 550 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 TEDDM1Q5T9Z0 273 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 RNF220Q5VTB9 566 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 FBXO42Q6P3S6 717 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 DARS2Q6PI48 645 aaKnown RBP7.92□□□□□ -1.14
SMC5-203ENST00000475540 CHST15Q7LFX5 561 aaPredicted RBP7.92□□□□□ -1.14
SMC5-203ENST00000475540 DTX2Q86UW9 622 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 ADGRG3Q86Y34 549 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 FAM156AQ8NDB6 213 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 ATRIPQ8WXE1 791 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 NELL1Q92832 810 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 DPH1Q9BZG8 443 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 SERTAD3Q9UJW9 196 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 USP19O94966 1318 aa7.92□□□□□ -1.14
SMC5-203ENST00000475540 A6NNZ2 444 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 ISM1B1AKI9 464 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 MYO1FO00160 1098 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 TLR5O60602 858 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 SUMO3P55854 103 aaPredicted RBP7.91□□□□□ -1.14
SMC5-203ENST00000475540 GBX1Q14549 363 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 GRM3Q14832 879 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 KIAA0753Q2KHM9 967 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 MGAT5BQ3V5L5 792 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 ZNF362Q5T0B9 420 aaPredicted RBP7.91□□□□□ -1.14
SMC5-203ENST00000475540 APOA5Q6Q788 366 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 ARHGEF25Q86VW2 580 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 RFKQ969G6 155 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 MESP1Q9BRJ9 268 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 ZNF518BQ9C0D4 1074 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 NDRG4Q9ULP0 352 aaKnown RBP7.91□□□□□ -1.14
SMC5-203ENST00000475540 ST3GAL5Q9UNP4 418 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 PAXBP1Q9Y5B6 917 aa7.91□□□□□ -1.14
SMC5-203ENST00000475540 LINC00473A8K010 186 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 TBX3O15119 743 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 FRS3O43559 492 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 URI1O94763 535 aaPredicted RBP7.9□□□□□ -1.14
SMC5-203ENST00000475540 NXPH3O95157 252 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 ZBED1O96006 694 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 HRGP04196 525 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 PDHA1P08559 390 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 ALDH9A1P49189 494 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 KRT17Q04695 432 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 EIF2B5Q13144 721 aaKnown RBP7.9□□□□□ -1.14
SMC5-203ENST00000475540 FAM153CQ494X1 144 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 RGS7BPQ6MZT1 257 aaPredicted RBP7.9□□□□□ -1.14
SMC5-203ENST00000475540 RD3Q7Z3Z2 195 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 BOLLQ8N9W6 283 aaKnown RBP7.9□□□□□ -1.14
SMC5-203ENST00000475540 LRTOMTQ8WZ04 291 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 UROC1Q96N76 676 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 HAPLN3Q96S86 360 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 MS4A7Q9GZW8 240 aaPredicted RBP7.9□□□□□ -1.14
SMC5-203ENST00000475540 SMURF2Q9HAU4 748 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 SERHLQ9NQF3 203 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 IL17RBQ9NRM6 502 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 SACM1LQ9NTJ5 587 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 SEMA4GQ9NTN9 838 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 CPNE7Q9UBL6 633 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 DKK3Q9UBP4 350 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 ENTPD2Q9Y5L3 495 aa7.9□□□□□ -1.14
SMC5-203ENST00000475540 SPATA31A6Q5VVP1 1343 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 hCG_1984214I3L0E3 225 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 GOLIM4O00461 696 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 TPP1O14773 563 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 SLC16A3O15427 465 aaKnown RBP7.89□□□□□ -1.15
SMC5-203ENST00000475540 MGEA5O60502 916 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 BRAFP15056 766 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 FAM193AP78312 1265 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 ZNF618Q5T7W0 954 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 PRIMA1Q86XR5 153 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 TIMP4Q99727 224 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 LRRC27Q9C0I9 530 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 KLK15Q9H2R5 256 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 A1CFQ9NQ94 594 aaKnown RBP7.89□□□□□ -1.15
SMC5-203ENST00000475540 SSX2IPQ9Y2D8 614 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
SMC5-203ENST00000475540 COX11Q9Y6N1 276 aa7.89□□□□□ -1.15
SMC5-203ENST00000475540 GCOM1H8Y6P7 765 aaPredicted RBP7.88□□□□□ -1.15
SMC5-203ENST00000475540 IGLV2-14P01704 120 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 ELFN1P0C7U0 828 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 ZKSCAN1P17029 563 aaPredicted RBP7.88□□□□□ -1.15
SMC5-203ENST00000475540 SOX10P56693 466 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 CNGA2Q16280 664 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 TSTD2Q5T7W7 516 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 ZNF551Q7Z340 670 aaPredicted RBP7.88□□□□□ -1.15
SMC5-203ENST00000475540 GAS2L3Q86XJ1 694 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 ZNF280BQ86YH2 543 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 RAPGEF4Q8WZA2 1011 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 CPNE5Q9HCH3 593 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
SMC5-203ENST00000475540 ASB6Q9NWX5 421 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms