RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 SHISA7A6NL88 538 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 PROB1E7EW31 1015 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 ZNF263O14978 683 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 RPN1P04843 607 aaKnown RBP13.12□□□□□ -0.31
SSR1-205ENST00000475213 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
SSR1-205ENST00000475213 LMO2P25791 158 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 CASP4P49662 377 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 PLEKHO2Q8TD55 490 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 SYT15Q9BQS2 421 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 TASP1Q9H6P5 420 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 DMAC2Q9NW81 257 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 WDR87Q6ZQQ6 2873 aa13.12□□□□□ -0.31
SSR1-205ENST00000475213 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
SSR1-205ENST00000475213 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 ARNTLO00327 626 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 ATP2C2O75185 946 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 F11P03951 625 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 CSH1P0DML2 217 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 CSH2P0DML3 217 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 WEE1P30291 646 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 NLRP12P59046 1061 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 PSMC1P62191 440 aaKnown RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 FCHO2Q0JRZ9 810 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 DPYDQ12882 1025 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 BECN1Q14457 450 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 DDR2Q16832 855 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 TMEM150AQ86TG1 271 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 C1orf210Q8IVY1 113 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 TMEM174Q8WUU8 243 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 FUBP3Q96I24 572 aaKnown RBP eCLIP13.11□□□□□ -0.312e-8■■□□□ 13.8
SSR1-205ENST00000475213 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 SLC46A2Q9BY10 475 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 BCO2Q9BYV7 579 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 CDH9Q9ULB4 789 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 MAGED2Q9UNF1 606 aaPredicted RBP13.11□□□□□ -0.31
SSR1-205ENST00000475213 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
SSR1-205ENST00000475213 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
SSR1-205ENST00000475213 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 PDXKO00764 312 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 DPYSL4O14531 572 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 CHADO15335 359 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 GFRA3O60609 400 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 TACC1O75410 805 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 RHOBTB3O94955 611 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 ZNF202O95125 648 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 PRAMEF12O95522 483 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 PDGFRBP09619 1106 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 MYL6P60660 151 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 FZD5Q13467 585 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 TRPC3Q13507 836 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 WDR72Q3MJ13 1102 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 KRBA2Q6ZNG9 492 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 C4orf50Q6ZRC1 276 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 CMTM8Q8IZV2 173 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 NELL2Q99435 816 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 XYLT2Q9H1B5 865 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 OBP2AQ9NY56 170 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
SSR1-205ENST00000475213 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 PIAS3Q9Y6X2 628 aa13.1□□□□□ -0.31
SSR1-205ENST00000475213 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 NCAM2O15394 837 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 PHACTR2O75167 634 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 NOL4O94818 638 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 STAU1O95793 577 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 NR3C1P04150 777 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 ATICP31939 592 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 GNL1P36915 607 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 MAGEA9P43362 315 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 MAGEA11P43364 429 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 AP3M2P53677 418 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 TNNC1P63316 161 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 CLDN10P78369 228 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms