RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SMIM28A0A1B0GU29 152 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 RFC1P35251 1148 aaPredicted RBP22.92■■□□□ 1.26
CCM2-206ENST00000474617 RPL21P46778 160 aaKnown RBP22.92■■□□□ 1.26
CCM2-206ENST00000474617 TAF6P49848 677 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 PLTPP55058 493 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 KRT17Q04695 432 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 GNASQ5JWF2 1037 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 UBXN11Q5T124 520 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 CYP4A22Q5TCH4 519 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 ZDHHC24Q6UX98 284 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 ARFGAP2Q8N6H7 521 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 CNPY3Q9BT09 278 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 TRIM31Q9BZY9 425 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 HMGXB4Q9UGU5 601 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 CYTH4Q9UIA0 394 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 TSPAN16Q9UKR8 245 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 SCN10AQ9Y5Y9 1956 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 F8VP50 259 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 ERBB2P04626 1255 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 RARGP13631 454 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 PAX3P23760 479 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 LRPAP1P30533 357 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 ZNF143P52747 638 aaPredicted RBP22.92■■□□□ 1.26
CCM2-206ENST00000474617 HIC1Q14526 733 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 SPOCD1Q6ZMY3 1216 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 ZNF365Q70YC5 407 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 ARCQ7LC44 396 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 LIMS2Q7Z4I7 341 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 HOOK3Q86VS8 718 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 VSIG1Q86XK7 387 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 CRYBG2Q8N1P7 616 aa22.92■■□□□ 1.26
CCM2-206ENST00000474617 UBLCP1Q8WVY7 318 aaPredicted RBP22.92■■□□□ 1.26
CCM2-206ENST00000474617 LENG1Q96BZ8 264 aaPredicted RBP22.92■■□□□ 1.26
CCM2-206ENST00000474617 H0YGN5 161 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 PSMC4P43686 418 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 PMS2P54278 862 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 TAZQ16635 292 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 PKDCCQ504Y2 493 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 ZFYVE27Q5T4F4 411 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 AGBL2Q5U5Z8 902 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 TRMT10CQ7L0Y3 403 aaKnown RBP22.91■■□□□ 1.26
CCM2-206ENST00000474617 TOP6BLQ8N6T0 577 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 FBXO25Q8TCJ0 367 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 TMEM40Q8WWA1 233 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 C1orf54Q8WWF1 131 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 TNIP3Q96KP6 325 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 ATP6V1G3Q96LB4 118 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 TRAIPQ9BWF2 469 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 TUBGCP4Q9UGJ1 667 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 IPPQ9Y573 584 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 NFS1Q9Y697 457 aa22.91■■□□□ 1.26
CCM2-206ENST00000474617 KPNA7A9QM74 516 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 GOLGA8SH3BPF8 625 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 DPYSL4O14531 572 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 ATF2P15336 505 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 CST5P28325 142 aaPredicted RBP22.9■■□□□ 1.26
CCM2-206ENST00000474617 RDXP35241 583 aaKnown RBP22.9■■□□□ 1.26
CCM2-206ENST00000474617 ACADSBP45954 432 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 OGDHQ02218 1023 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 SLC25A11Q02978 314 aaKnown RBP22.9■■□□□ 1.26
CCM2-206ENST00000474617 UAP1Q16222 522 aaPredicted RBP22.9■■□□□ 1.26
CCM2-206ENST00000474617 TMEM110Q86TL2 294 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 RIN2Q8WYP3 895 aaPredicted RBP22.9■■□□□ 1.26
CCM2-206ENST00000474617 SLC4A5Q9BY07 1137 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 TMBIM4Q9HC24 238 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 ASIC3Q9UHC3 531 aa22.9■■□□□ 1.26
CCM2-206ENST00000474617 ABT1Q9ULW3 272 aaKnown RBP22.9■■□□□ 1.26
CCM2-206ENST00000474617 hCG_1818297A0A087WSY0 165 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 LRCH4O75427 683 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 GPD1P21695 349 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 CDKN2BP42772 138 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 SKOR1P84550 965 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 GOLGA7BQ2TAP0 167 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 CEP85LQ5SZL2 805 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 FAM102AQ5T9C2 384 aaPredicted RBP22.89■■□□□ 1.26
CCM2-206ENST00000474617 DENND2CQ68D51 928 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 SERINC5Q86VE9 423 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 SMC1BQ8NDV3 1235 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 TRPV1Q8NER1 839 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 APPL2Q8NEU8 664 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 NKD2Q969F2 451 aaPredicted RBP22.89■■□□□ 1.26
CCM2-206ENST00000474617 TMEM109Q9BVC6 243 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 SNX25Q9H3E2 840 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 PRDM10Q9NQV6 1147 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 METTL5Q9NRN9 209 aaKnown RBP22.89■■□□□ 1.26
CCM2-206ENST00000474617 CHST7Q9NS84 486 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 PTPN22Q9Y2R2 807 aa22.89■■□□□ 1.26
CCM2-206ENST00000474617 TMEM88BA6NKF7 163 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 GPR182O15218 404 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 SHOX2O60902 331 aaPredicted RBP22.88■■□□□ 1.25
CCM2-206ENST00000474617 RPS6KA5O75582 802 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 LMAN1P49257 510 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 BCAT1P54687 386 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 NOGQ13253 232 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 TWF2Q6IBS0 349 aaKnown RBP22.88■■□□□ 1.25
CCM2-206ENST00000474617 LEKR1Q6ZMV7 388 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 FAM228AQ86W67 206 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 CCDC114Q96M63 670 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 ATP8A1Q9Y2Q0 1164 aa22.88■■□□□ 1.25
CCM2-206ENST00000474617 NEU2Q9Y3R4 380 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms