RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	ZNF551	Q7Z340	670 aa	Predicted RBP	4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	SLC35G2	Q8TBE7	412 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	DENND1A	Q8TEH3	1009 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	DIS3L	Q8TF46	1054 aa	Known RBP	4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	WASF1	Q92558	559 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	FAM136A	Q96C01	138 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	MVB12A	Q96EY5	273 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	MAP3K14	Q99558	947 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	C1orf43	Q9BWL3	253 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	OBP2A	Q9NY56	170 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CALCOCO1	Q9P1Z2	691 aa		4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	DDX20	Q9UHI6	824 aa	Known RBP	4.55	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GOLGA6C	A6NDK9	693 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GOLGA6B	A6NDN3	693 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	KCNU1	A8MYU2	1149 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	NT5C1B-RDH14	C9J2C7	533 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	DTNB	O60941	627 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	JTB	O76095	146 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ANXA1	P04083	346 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GOLGA6D	P0CG33	693 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	MYB	P10242	640 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CD6	P30203	668 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GNAL	P38405	381 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	BOP1	Q14137	746 aa	Known RBP	4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GALE	Q14376	348 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CEP85	Q6P2H3	762 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	TECPR1	Q7Z6L1	1165 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GRAMD1C	Q8IYS0	662 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ZBTB34	Q8NCN2	500 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	OSBPL9	Q96SU4	736 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ACO2	Q99798	780 aa	Known RBP	4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	MACROD1	Q9BQ69	325 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GOLGA6A	Q9NYA3	693 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ELOVL5	Q9NYP7	299 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GABBR1	Q9UBS5	961 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272	TBC1D30	Q9Y2I9	924 aa		4.54	□□□□□ -1.68
TMEM50B-208	ENST00000474272		A6NNZ2	444 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	PRRT4	C9JH25	899 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272		H0YIZ8	118 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	KIF3B	O15066	747 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ERC2	O15083	957 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	KCNAB3	O43448	404 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	PRC1	O43663	620 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	NTN1	O95631	604 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	TOP3B	O95985	862 aa	Known RBP	4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ITGAL	P20701	1170 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CERS1	P27544	350 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CYP2C18	P33260	490 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	LIPA	P38571	399 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ARHGAP25	P42331	645 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CLCN2	P51788	898 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	DSC2	Q02487	901 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GBX1	Q14549	363 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GRM3	Q14832	879 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	PGS1	Q32NB8	556 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	AWAT2	Q6E213	333 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	SLC4A10	Q6U841	1118 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	NAPRT	Q6XQN6	538 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	SLC29A4	Q7RTT9	530 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	MAVS	Q7Z434	540 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	PPP1R35	Q8TAP8	253 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	NSUN6	Q8TEA1	469 aa	Known RBP	4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	TIFA	Q96CG3	184 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	SEMA4C	Q9C0C4	833 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	RAD54B	Q9Y620	910 aa		4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272	CFAP20	Q9Y6A4	193 aa	Known RBP	4.53	□□□□□ -1.68
TMEM50B-208	ENST00000474272		H3BML4	177 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	PPEF2	O14830	753 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	ALDH2	P05091	517 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	GNAI3	P08754	354 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	SMARCA1	P28370	1054 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	ALDH9A1	P49189	494 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	GNAI1	P63096	354 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	RABEP1	Q15276	862 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	ARHGAP29	Q52LW3	1261 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	PCID2	Q5JVF3	399 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	OVCH2	Q7RTZ1	564 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	DGKH	Q86XP1	1220 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	PDSS2	Q86YH6	399 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	DENND1C	Q8IV53	801 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	CNGA4	Q8IV77	575 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	RGMA	Q96B86	450 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	CCDC136	Q96JN2	1154 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	WAC	Q9BTA9	647 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	PDGFC	Q9NRA1	345 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	DLL3	Q9NYJ7	618 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	PCDHA3	Q9Y5H8	950 aa		4.52	□□□□□ -1.69
TMEM50B-208	ENST00000474272	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	SMIM35	A0A1B0GVV1	85 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	QSOX1	O00391	747 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	CTNND1	O60716	968 aa	Known RBP	4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	DNAJB5	O75953	348 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	ENG	P17813	658 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	GCLC	P48506	637 aa	Predicted RBP	4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	CCT4	P50991	539 aa	Known RBP	4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	MAP2K6	P52564	334 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	CYP4F2	P78329	520 aa		4.51	□□□□□ -1.69
TMEM50B-208	ENST00000474272	GPR162	Q16538	588 aa		4.51	□□□□□ -1.69

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