RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 HEBP1Q9NRV9 189 aa19.18■□□□□ 0.66
UPF3A-203ENST00000474056 FAM86C1Q9NVL1 165 aa19.18■□□□□ 0.66
UPF3A-203ENST00000474056 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
UPF3A-203ENST00000474056 MAGED2Q9UNF1 606 aaPredicted RBP19.18■□□□□ 0.66
UPF3A-203ENST00000474056 KANSL1LA0AUZ9 987 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 LRRN2O75325 713 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 AKAP3O75969 853 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 CLSTN1O94985 981 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 GDI1P31150 447 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-203ENST00000474056 GNL1P36915 607 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-203ENST00000474056 RPL10AP62906 217 aaKnown RBP19.17■□□□□ 0.66
UPF3A-203ENST00000474056 PRKCQQ04759 706 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 NCOA4Q13772 614 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 ZNF699Q32M78 642 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 ZCWPW2Q504Y3 356 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 C4orf50Q6ZRC1 276 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 MFSD6LQ8IWD5 586 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 PJA1Q8NG27 643 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 DNASE1L2Q92874 299 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 SHDQ96IW2 340 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 GCNAQ96QF7 691 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 DDX23Q9BUQ8 820 aaKnown RBP19.17■□□□□ 0.66
UPF3A-203ENST00000474056 SNX25Q9H3E2 840 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 DPEP3Q9H4B8 488 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 TASP1Q9H6P5 420 aa19.17■□□□□ 0.66
UPF3A-203ENST00000474056 MAGEC2Q9UBF1 373 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-203ENST00000474056 MAPK13O15264 365 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 TADA3O75528 432 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 PRAMEF12O95522 483 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 F11P03951 625 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 FAM163BP0C2L3 166 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 GLULP15104 373 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 CD72P21854 359 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 BDNFP23560 247 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 RAP1GAPP47736 663 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 NLRP12P59046 1061 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 ZACNQ401N2 412 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 ZNF667Q5HYK9 610 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 MDH1BQ5I0G3 518 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 SCARA5Q6ZMJ2 495 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 TPRG1Q6ZUI0 275 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 SV2AQ7L0J3 742 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 SCN4BQ8IWT1 228 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 DTWD2Q8NBA8 298 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 IRF7Q92985 503 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 E2F7Q96AV8 911 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 PCED1BQ96HM7 432 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 SMYD3Q9H7B4 428 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 DLGAP2Q9P1A6 1054 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 SIT1Q9Y3P8 196 aa19.16■□□□□ 0.66
UPF3A-203ENST00000474056 FANCMQ8IYD8 2048 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 PIEZO1Q92508 2521 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 SHISA7A6NL88 538 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 SLC38A8A6NNN8 435 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 NOL4O94818 638 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 TRIM49P0CI25 452 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 TRIM49CP0CI26 452 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 MAGEA11P43364 429 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 VAMP7P51809 220 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 CYP27A1Q02318 531 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 ADAM9Q13443 819 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 MAPRE1Q15691 268 aaKnown RBP19.15■□□□□ 0.66
UPF3A-203ENST00000474056 ALYREFQ86V81 257 aaKnown RBP19.15■□□□□ 0.66
UPF3A-203ENST00000474056 FAM186BQ8IYM0 893 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 MYCBPAPQ8TBZ2 947 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 ATOH1Q92858 354 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-203ENST00000474056 LRRC3BQ96PB8 259 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 SLC46A2Q9BY10 475 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 LTB4R2Q9NPC1 389 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 MTF2Q9Y483 593 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-203ENST00000474056 PCDHA5Q9Y5H7 936 aa19.15■□□□□ 0.66
UPF3A-203ENST00000474056 A8MXQ7 604 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 DPYSL4O14531 572 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 IKBKBO14920 756 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 ZNF263O14978 683 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 PRCPP42785 496 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 CDH8P55286 799 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 UBXN2BQ14CS0 331 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 TXNDC8Q6A555 127 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 INTS8Q75QN2 995 aaKnown RBP19.14■□□□□ 0.65
UPF3A-203ENST00000474056 MAB21L3Q8N8X9 362 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 SPATA20Q8TB22 786 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 TRMT2BQ96GJ1 504 aaKnown RBP19.14■□□□□ 0.65
UPF3A-203ENST00000474056 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 GSDMAQ96QA5 445 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 SMG9Q9H0W8 520 aaKnown RBP19.14■□□□□ 0.65
UPF3A-203ENST00000474056 SDCBP2Q9H190 292 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 RMND1Q9NWS8 449 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 UXTQ9UBK9 157 aaPredicted RBP19.14■□□□□ 0.65
UPF3A-203ENST00000474056 MYO15AQ9UKN7 3530 aa19.14■□□□□ 0.65
UPF3A-203ENST00000474056 ARNTLO00327 626 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 HLA-DRAP01903 254 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 PTPN1P18031 435 aaKnown RBP19.13■□□□□ 0.65
UPF3A-203ENST00000474056 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
UPF3A-203ENST00000474056 TARSP26639 723 aaKnown RBP19.13■□□□□ 0.65
UPF3A-203ENST00000474056 WEE1P30291 646 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 PSMC2P35998 433 aaKnown RBP19.13■□□□□ 0.65
UPF3A-203ENST00000474056 GRIK1P39086 918 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 PIK3CAP42336 1068 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms