RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CGNQ9P2M7 1197 aaKnown RBP14.53□□□□□ -0.08
CHD3-209ENST00000473376 SIX4Q9UIU6 781 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 CDV3Q9UKY7 258 aaKnown RBP14.53□□□□□ -0.08
CHD3-209ENST00000473376 CDH9Q9ULB4 789 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 SNX9Q9Y5X1 595 aa14.53□□□□□ -0.08
CHD3-209ENST00000473376 UBE4BO95155 1302 aa14.52□□□□□ -0.08
CHD3-209ENST00000473376 HRO43593 1189 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 YEATS4O95619 227 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 USP17L7P0C7H9 530 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 SOX9P48436 509 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 ATXN1P54253 815 aaKnown RBP14.52□□□□□ -0.09
CHD3-209ENST00000473376 WNT7BP56706 349 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 PON2Q15165 354 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 E2F4Q16254 413 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 SPATA2LQ8IUW3 424 aaPredicted RBP14.52□□□□□ -0.09
CHD3-209ENST00000473376 ADGRF2Q8IZF7 708 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 IQUBQ8NA54 791 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 ZNF507Q8TCN5 953 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 NETO1Q8TDF5 533 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 SAAL1Q96ER3 474 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 ZFYVE19Q96K21 471 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
CHD3-209ENST00000473376 PI4K2AQ9BTU6 479 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 TRIM9Q9C026 710 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 IKZF4Q9H2S9 585 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 PDE11AQ9HCR9 933 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 HPS4Q9NQG7 708 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 TBC1D7Q9P0N9 293 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 GTF3C4Q9UKN8 822 aa14.52□□□□□ -0.09
CHD3-209ENST00000473376 A0A087X0B3 334 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 SPTLC2O15270 562 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 STAU1O95793 577 aaKnown RBP14.51□□□□□ -0.09
CHD3-209ENST00000473376 TNNC2P02585 160 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 CYP2F1P24903 491 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 TNK2Q07912 1038 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 TXNDC8Q6A555 127 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 EPM2AIP1Q7L775 607 aaPredicted RBP14.51□□□□□ -0.09
CHD3-209ENST00000473376 TMEM174Q8WUU8 243 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 OSCP1Q8WVF1 389 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 DDX1Q92499 740 aaKnown RBP14.51□□□□□ -0.09
CHD3-209ENST00000473376 ATP2A3Q93084 1043 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 HPDLQ96IR7 371 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 MTMR12Q9C0I1 747 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 RBM12Q9NTZ6 932 aaKnown RBP14.51□□□□□ -0.09
CHD3-209ENST00000473376 USP18Q9UMW8 372 aa14.51□□□□□ -0.09
CHD3-209ENST00000473376 KIF26AQ9ULI4 1882 aaPredicted RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 TRAV19A0A0A6YYK7 116 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 MED19A0JLT2 244 aaPredicted RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 K7ELQ4 463 aaPredicted RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 SLC30A4O14863 429 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 CUTAO60888 179 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 TACC1O75410 805 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 KRT19P08727 400 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 WARSP23381 471 aaKnown RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 FNTBP49356 437 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 LIMK1P53667 647 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 NR1H3Q13133 447 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 MTF1Q14872 753 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 STK38Q15208 465 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 ZNF77Q15935 545 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 FAM173BQ6P4H8 233 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 Q6ZS52 159 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 C12orf56Q8IXR9 622 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 CPA6Q8N4T0 437 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 GAB3Q8WWW8 586 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 ZC3H10Q96K80 434 aaKnown RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 C7orf25Q9BPX7 421 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 TTLL2Q9BWV7 592 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 PARD6AQ9NPB6 346 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 SEMA4GQ9NTN9 838 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 HSPBP1Q9NZL4 362 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 MAGEC2Q9UBF1 373 aaPredicted RBP14.5□□□□□ -0.09
CHD3-209ENST00000473376 ARHGAP26Q9UNA1 814 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 CCL26Q9Y258 94 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 PCDHGA5Q9Y5G8 931 aa14.5□□□□□ -0.09
CHD3-209ENST00000473376 PVALEFA0A1B0GWK0 134 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 TRIM66O15016 1216 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 TADA3O75528 432 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 NOP14P78316 857 aaKnown RBP14.49□□□□□ -0.09
CHD3-209ENST00000473376 CEBPZQ03701 1054 aaKnown RBP14.49□□□□□ -0.09
CHD3-209ENST00000473376 EHHADHQ08426 723 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 USP4Q13107 963 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 DDR2Q16832 855 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 BMT2Q1RMZ1 405 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 FSTL4Q6MZW2 842 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 PRR23BQ6ZRT6 265 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 CACNA2D4Q7Z3S7 1137 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.49□□□□□ -0.09
CHD3-209ENST00000473376 ZSWIM2Q8NEG5 633 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 KBTBD7Q8WVZ9 684 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 CHFRQ96EP1 664 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 P2RY13Q9BPV8 354 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 SYT15Q9BQS2 421 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 FGFBP2Q9BYJ0 223 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 PANK2Q9BZ23 570 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 EBF3Q9H4W6 596 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 PCIF1Q9H4Z3 704 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms