RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CEP83Q9Y592 693 aa14.35□□□□□ -0.11
BRCA1-209ENST00000470026 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 ANK1P16157 1881 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 A8MUI8 341 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 TRAFD1O14545 582 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 B4GALT4O60513 344 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 FGFR1P11362 822 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 HARSP12081 509 aaKnown RBP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 CA4P22748 312 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 KDELR1P24390 212 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 STAT5BP51692 787 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 GDF10P55107 478 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 ARL4CP56559 192 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 YWHAEP62258 255 aaKnown RBP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 SETDB1Q15047 1291 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 MSS51Q4VC12 460 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 CYP4A22Q5TCH4 519 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 IER5Q5VY09 327 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 ANKRD22Q5VYY1 191 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 DENND1BQ6P3S1 775 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 KIAA0319LQ8IZA0 1049 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 AGGF1Q8N302 714 aaeCLIP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 MAB21L3Q8N8X9 362 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 LRRC8CQ8TDW0 803 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 ERP27Q96DN0 273 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 PAIP2Q9BPZ3 127 aaKnown RBP14.34□□□□□ -0.11
BRCA1-209ENST00000470026 ETNK1Q9HBU6 452 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 PTPRHQ9HD43 1115 aa14.34□□□□□ -0.11
BRCA1-209ENST00000470026 IGKV6-21A0A0C4DH24 114 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 WEE2P0C1S8 567 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 T-ENOLP0DO92 83 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 PSMA2P25787 234 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 POLR2BP30876 1174 aaKnown RBP14.33□□□□□ -0.11
BRCA1-209ENST00000470026 PHBP35232 272 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 RPL22P35268 128 aaKnown RBP14.33□□□□□ -0.11
BRCA1-209ENST00000470026 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.11
BRCA1-209ENST00000470026 CNTN2Q02246 1040 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 GAD2Q05329 585 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 ZNF394Q53GI3 561 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 SH3D19Q5HYK7 790 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 HP1BP3Q5SSJ5 553 aaPredicted RBP14.33□□□□□ -0.11
BRCA1-209ENST00000470026 FNBP1LQ5T0N5 605 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 FAM160B1Q5W0V3 765 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 CMASQ8NFW8 434 aaPredicted RBP14.33□□□□□ -0.11
BRCA1-209ENST00000470026 JOSD2Q8TAC2 188 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 NSMCE1Q8WV22 266 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 ZNF75CPQ92670 426 aaPredicted RBP14.33□□□□□ -0.11
BRCA1-209ENST00000470026 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 CYTH4Q9UIA0 394 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 LRRC37A2A6NM11 1700 aa14.33□□□□□ -0.11
BRCA1-209ENST00000470026 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 CST8O60676 142 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 IFNB1P01574 187 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 KRT3P12035 628 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 GMPSP49915 693 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 SLC8A3P57103 927 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 PLCB3Q01970 1234 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 TFDP1Q14186 410 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 HADHQ16836 314 aaKnown RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 KLHL38Q2WGJ6 581 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 NOL9Q5SY16 702 aaKnown RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 OTOAQ7RTW8 1153 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 ZBTB33Q86T24 672 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 PYROXD1Q8WU10 500 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 DCAKDQ8WVC6 231 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 ALKBH8Q96BT7 664 aaKnown RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 SLC7A6OSQ96CW6 309 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-209ENST00000470026 BCO2Q9BYV7 579 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 WDR35Q9P2L0 1181 aa14.33□□□□□ -0.12
BRCA1-209ENST00000470026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-209ENST00000470026 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 C2CD2LO14523 706 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 TM9SF1O15321 606 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 BANF1O75531 89 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 PRKCBP05771 671 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 KRT4P19013 534 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 ALDH3A1P30838 453 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 SSTR1P30872 391 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 TRPC3Q13507 836 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 ACAP1Q15027 740 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
BRCA1-209ENST00000470026 ZNF699Q32M78 642 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 SLC45A4Q5BKX6 768 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 HHATQ5VTY9 493 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 LVRNQ6Q4G3 990 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 ANKMY2Q8IV38 441 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 FAM167AQ96KS9 214 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 SAE1Q9UBE0 346 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-209ENST00000470026 AFG3L2Q9Y4W6 797 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 MGAMO43451 1857 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 APOC4-APOC2K7ER74 178 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms