RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CSH1P0DML2 217 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 CSH2P0DML3 217 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 GDI1P31150 447 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 MAGEA11P43364 429 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 PSMC1P62191 440 aaKnown RBP18.28■□□□□ 0.52
SSBP1-207ENST00000468267 DLG4P78352 724 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 BIRC3Q13489 604 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 PNOCQ13519 176 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 NCOA4Q13772 614 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 MAPRE1Q15691 268 aaKnown RBP18.28■□□□□ 0.52
SSBP1-207ENST00000468267 SDHAF4Q5VUM1 108 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 CEP135Q66GS9 1140 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 C4orf50Q6ZRC1 276 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 TMEM150AQ86TG1 271 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 PJA1Q8NG27 643 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 ATOH1Q92858 354 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-207ENST00000468267 IRF7Q92985 503 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 GCNAQ96QF7 691 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 TRPV5Q9NQA5 729 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 MAGEC2Q9UBF1 373 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-207ENST00000468267 COL4A3Q01955 1670 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 IKBKBO14920 756 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 NOL4O94818 638 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 VNN1O95497 513 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 F11P03951 625 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 DCNP07585 359 aaKnown RBP18.27■□□□□ 0.52
SSBP1-207ENST00000468267 NR2F2P24468 414 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 NLRP12P59046 1061 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 CYP4F8P98187 520 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 FAM160A1Q05DH4 1040 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 C1orf220Q5T0J3 134 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 GPIHBP1Q8IV16 184 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 OR6B3Q8NGW1 331 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 MYCBPAPQ8TBZ2 947 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 MYLPFQ96A32 169 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 PHOX2BQ99453 314 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 SLC46A2Q9BY10 475 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 HEBP1Q9NRV9 189 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 DLGAP2Q9P1A6 1054 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 NXF1Q9UBU9 619 aaKnown RBP18.27■□□□□ 0.52
SSBP1-207ENST00000468267 ZMYM5Q9UJ78 669 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 NME7Q9Y5B8 376 aa18.27■□□□□ 0.52
SSBP1-207ENST00000468267 ANAPC1Q9H1A4 1944 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 SLC38A8A6NNN8 435 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 ZNF263O14978 683 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 CD72P21854 359 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 RPL13P26373 211 aaKnown RBP18.26■□□□□ 0.51
SSBP1-207ENST00000468267 FCHO2Q0JRZ9 810 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 ZNF699Q32M78 642 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 ZACNQ401N2 412 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 VSTM1Q6UX27 236 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 TPRG1Q6ZUI0 275 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 SCN4BQ8IWT1 228 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 STKLD1Q8NE28 680 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 TRMT2BQ96GJ1 504 aaKnown RBP18.26■□□□□ 0.51
SSBP1-207ENST00000468267 MYRFLQ96LU7 910 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 TIGD1Q96MW7 591 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 LRRC3BQ96PB8 259 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 OSBPL6Q9BZF3 934 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 FAM86C1Q9NVL1 165 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 RMND1Q9NWS8 449 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 OBP2AQ9NY56 170 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 UXTQ9UBK9 157 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-207ENST00000468267 MAGED2Q9UNF1 606 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-207ENST00000468267 MTF2Q9Y483 593 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-207ENST00000468267 COL4A2P08572 1712 aa18.26■□□□□ 0.51
SSBP1-207ENST00000468267 FAM170BA6NMN3 283 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 SOBPA7XYQ1 873 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 DPYSL4O14531 572 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 AKAP3O75969 853 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 GLULP15104 373 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 PTPN1P18031 435 aaKnown RBP18.25■□□□□ 0.51
SSBP1-207ENST00000468267 BDNFP23560 247 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 DDX6P26196 483 aaKnown RBP eCLIP18.25■□□□□ 0.51
SSBP1-207ENST00000468267 MRE11P49959 708 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 VAMP7P51809 220 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 CYP27A1Q02318 531 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 ADAM9Q13443 819 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 SGSM1Q2NKQ1 1148 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 ZCWPW2Q504Y3 356 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 ZNF667Q5HYK9 610 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 ZNF852Q6ZMS4 543 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 SV2AQ7L0J3 742 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 ALYREFQ86V81 257 aaKnown RBP18.25■□□□□ 0.51
SSBP1-207ENST00000468267 YAF2Q8IY57 180 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 SMYD4Q8IYR2 804 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-207ENST00000468267 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 SPATA17Q96L03 361 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 GSDMAQ96QA5 445 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 NELL2Q99435 816 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 LTB4R2Q9NPC1 389 aa18.25■□□□□ 0.51
SSBP1-207ENST00000468267 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
SSBP1-207ENST00000468267 FRYLO94915 3013 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 SHISA7A6NL88 538 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 A8MXQ7 604 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 ARNTLO00327 626 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 CHADO15335 359 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 LRRN2O75325 713 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 SMC2O95347 1197 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms