RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 SEPT8Q92599 483 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 RMDN1Q96DB5 314 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 PAAF1Q9BRP4 392 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 TMEM161AQ9NX61 479 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 CACNG4Q9UBN1 327 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 NXF1Q9UBU9 619 aaKnown RBP9.39□□□□□ -0.91
UBA3-208ENST00000465627 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 NCANO14594 1321 aa9.39□□□□□ -0.91
UBA3-208ENST00000465627 PRR23AA6NEV1 266 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 KPNA7A9QM74 516 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 C3orf80F5H4A9 247 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 GABRDO14764 452 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 TIMP1P01033 207 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 FGFR1P11362 822 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 KRT5P13647 590 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 RFC2P35250 354 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 PDE6CP51160 858 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 CCL23P55773 120 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 YWHAEP62258 255 aaKnown RBP9.38□□□□□ -0.91
UBA3-208ENST00000465627 FPGSQ05932 587 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 MYO1EQ12965 1108 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 PTP4A2Q12974 167 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 SPA17Q15506 151 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 CLEC16AQ2KHT3 1053 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 SCARA5Q6ZMJ2 495 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 DNAAF5Q86Y56 855 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 WDTC1Q8N5D0 677 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 ZNF606Q8WXB4 792 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
UBA3-208ENST00000465627 C16orf45Q96MC5 204 aaPredicted RBP9.38□□□□□ -0.91
UBA3-208ENST00000465627 CASD1Q96PB1 797 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 WDR24Q96S15 920 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 MRPL45Q9BRJ2 306 aaKnown RBP9.38□□□□□ -0.91
UBA3-208ENST00000465627 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 DEF6Q9H4E7 631 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 BARX2Q9UMQ3 279 aaPredicted RBP9.38□□□□□ -0.91
UBA3-208ENST00000465627 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 L1RE1Q9UN81 338 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 MYH10P35580 1976 aa9.38□□□□□ -0.91
UBA3-208ENST00000465627 A0A0A6YYK5 440 aaPredicted RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 TMEM189-UBE2V1I3L0A0 370 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 DDHD2O94830 711 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 EFEMP2O95967 443 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TUBB4AP04350 444 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TMEM253P0C7T8 217 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 P4HA1P13674 534 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 IL9P15248 144 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 CD58P19256 250 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TNFAIP3P21580 790 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 WARSP23381 471 aaKnown RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 GNA15P30679 374 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 USP8P40818 1118 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TAF6P49848 677 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 CLCNKBP51801 687 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 GALCP54803 685 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 NOMO3P69849 1222 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 CENPCQ03188 943 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TUSC3Q13454 348 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 PTPN14Q15678 1187 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 SV2CQ496J9 727 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 CCDC122Q5T0U0 273 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TAF3Q5VWG9 929 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 C16orf59Q7L2K0 433 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 DPH6Q7L8W6 267 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 UNC93AQ86WB7 457 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 OSTM1Q86WC4 334 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 CRYBG2Q8N1P7 616 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TTC39CQ8N584 583 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TOP6BLQ8N6T0 577 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TMEM176AQ96HP8 235 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 ZNF560Q96MR9 790 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 RPS6KC1Q96S38 1066 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 SLC28A3Q9HAS3 691 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 RC3H2Q9HBD1 1191 aaKnown RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 LZTFL1Q9NQ48 299 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TMEM39AQ9NV64 488 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TBC1D13Q9NVG8 400 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 MYO1AQ9UBC5 1043 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 SNX9Q9Y5X1 595 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TCRBV5S1A1TA0A578 114 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 ANKRD62A6NC57 917 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 M0QZQ0 153 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 KIF2AO00139 706 aaPredicted RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 TULP1O00294 542 aaPredicted RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 O00370 1275 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 PODXLO00592 558 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 RTN2O75298 545 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 MTA2O94776 668 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 POMCP01189 267 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 CYP11A1P05108 521 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 H2AFZP0C0S5 128 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 TNNT1P13805 278 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 PAX3P23760 479 aa9.37□□□□□ -0.91
UBA3-208ENST00000465627 BRD2P25440 801 aaKnown RBP9.37□□□□□ -0.91
UBA3-208ENST00000465627 NDST1P52848 882 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms