RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 SLC38A8A6NNN8 435 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CHADO15335 359 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 PHACTR2O75167 634 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CSH1P0DML2 217 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CSH2P0DML3 217 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CCNE1P24864 410 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 SOX9P48436 509 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 FZD5Q13467 585 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 TRPC3Q13507 836 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 WDR72Q3MJ13 1102 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CFAP221Q4G0U5 840 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 MAB21L3Q8N8X9 362 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CSGALNACT1Q8TDX6 532 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 FAM3CQ92520 227 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 MYLPFQ96A32 169 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CLDN23Q96B33 292 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 ELMO3Q96BJ8 720 aa17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 NXF1Q9UBU9 619 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-208ENST00000454134 CACNA1IQ9P0X4 2223 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 A0A1W2PQ27 194 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 A0A1W2PQ64 194 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 A0A1W2PQD8 194 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 LRRIQ3A6PVS8 624 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 MAN2B1O00754 1011 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 NCAM2O15394 837 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 NOL4O94818 638 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 NR3C1P04150 777 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 MYL1P05976 194 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 BDNFP23560 247 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 GNL1P36915 607 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 TNNC1P63316 161 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 CYP27A1Q02318 531 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 BIRC3Q13489 604 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 TDRD10Q5VZ19 366 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 TXNDC8Q6A555 127 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 CMTM8Q8IZV2 173 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 ZNF687Q8N1G0 1237 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 OR6B3Q8NGW1 331 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 BPIFB1Q8TDL5 484 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 PARD3BQ8TEW8 1205 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 FUBP3Q96I24 572 aaKnown RBP eCLIP17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 XYLT2Q9H1B5 865 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 MAGEC2Q9UBF1 373 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 MAPK8IP1Q9UQF2 711 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 CCL26Q9Y258 94 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 MYO15AQ9UKN7 3530 aa17.59■□□□□ 0.41
NCKIPSD-208ENST00000454134 PATJQ8NI35 1801 aa17.58■□□□□ 0.41
NCKIPSD-208ENST00000454134 LAMTOR5O43504 91 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 TADA3O75528 432 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 CLSTN1O94985 981 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 KPNA1P52294 538 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 DLG4P78352 724 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 TNK2Q07912 1038 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 DPYDQ12882 1025 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 MDH1BQ5I0G3 518 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 CEP135Q66GS9 1140 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 KRBA2Q6ZNG9 492 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 C4orf50Q6ZRC1 276 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 SLC9A9Q8IVB4 645 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 MRPS31Q92665 395 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 PCED1BQ96HM7 432 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 DPEP3Q9H4B8 488 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 OBP2AQ9NY56 170 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 GTSE1Q9NYZ3 720 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 DENND4CQ5VZ89 1909 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 OBSL1O75147 1896 aa17.58■□□□□ 0.4
NCKIPSD-208ENST00000454134 PDXKO00764 312 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 TACC1O75410 805 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZNF202O95125 648 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 WEE1P30291 646 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 AVPR1AP37288 418 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 MAGEA11P43364 429 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 RPS9P46781 194 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 CSTF1Q05048 431 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 ARHGAP29Q52LW3 1261 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 MON1AQ86VX9 555 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 CELF5Q8N6W0 485 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 USP13Q92995 863 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 CCDC47Q96A33 483 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRMT2BQ96GJ1 504 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 MYRFLQ96LU7 910 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 SMYD3Q9H7B4 428 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 LMAN1LQ9HAT1 526 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRPC7Q9HCX4 862 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 UXTQ9UBK9 157 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 F5P12259 2224 aa17.57■□□□□ 0.4
NCKIPSD-208ENST00000454134 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 VNN1O95497 513 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 STAU1O95793 577 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 C4BPAP04003 597 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 DDX6P26196 483 aaKnown RBP eCLIP17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 ATICP31939 592 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 GRIK1P39086 918 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 MAGEA9P43362 315 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 RAP1GAPP47736 663 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 CDH8P55286 799 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 CLDN10P78369 228 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 MTAPQ13126 283 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms