RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CFAP221Q4G0U5 840 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 SCN4BQ8IWT1 228 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 MYCBPAPQ8TBZ2 947 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 PBXIP1Q96AQ6 731 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 PCED1BQ96HM7 432 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 FUBP3Q96I24 572 aaKnown RBP eCLIP26.67■■□□□ 1.86
UFD1-204ENST00000447868 ZSWIM3Q96MP5 696 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 SLITRK6Q9H5Y7 841 aa26.67■■□□□ 1.86
UFD1-204ENST00000447868 ARMCX3Q9UH62 379 aaPredicted RBP26.67■■□□□ 1.86
UFD1-204ENST00000447868 LRRN2O75325 713 aa26.66■■□□□ 1.86
UFD1-204ENST00000447868 BDNFP23560 247 aa26.66■■□□□ 1.86
UFD1-204ENST00000447868 ASPAP45381 313 aa26.66■■□□□ 1.86
UFD1-204ENST00000447868 RPL10AP62906 217 aaKnown RBP26.66■■□□□ 1.86
UFD1-204ENST00000447868 NOP14P78316 857 aaKnown RBP26.66■■□□□ 1.86
UFD1-204ENST00000447868 CEP63Q96MT8 703 aa26.66■■□□□ 1.86
UFD1-204ENST00000447868 ATXN3LQ9H3M9 355 aa26.66■■□□□ 1.86
UFD1-204ENST00000447868 APOBEC3GQ9HC16 384 aaKnown RBP26.66■■□□□ 1.86
UFD1-204ENST00000447868 MAGED2Q9UNF1 606 aaPredicted RBP26.66■■□□□ 1.86
UFD1-204ENST00000447868 CCDC40Q4G0X9 1142 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 FAM78AQ5JUQ0 283 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 GAREM2Q75VX8 874 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 FILIP1Q7Z7B0 1213 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 B3GALNT2Q8NCR0 500 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 CCDC150Q8NCX0 1101 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 SEMA4DQ92854 862 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 FBXL21Q9UKT6 434 aa26.65■■□□□ 1.86
UFD1-204ENST00000447868 FGF19O95750 216 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 CFHP08603 1231 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 MAGEA11P43364 429 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 ORC1Q13415 861 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 STXBP5Q5T5C0 1151 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 TANGO2Q6ICL3 276 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 FBXL13Q8NEE6 735 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 NUP62CLQ9H1M0 184 aa26.64■■□□□ 1.86
UFD1-204ENST00000447868 PTPRDP23468 1912 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 PDGFBP01127 241 aaPredicted RBP26.63■■□□□ 1.85
UFD1-204ENST00000447868 CSH1P0DML2 217 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 CSH2P0DML3 217 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 SRFP11831 508 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 HMGA1P17096 107 aaKnown RBP26.63■■□□□ 1.85
UFD1-204ENST00000447868 GRIK1P39086 918 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 CYP4F8P98187 520 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 CBWD6Q4V339 395 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 CBWD3Q5JTY5 395 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 CBWD5Q5RIA9 395 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 FRMD5Q7Z6J6 570 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 ZSCAN18Q8TBC5 510 aaPredicted RBP26.63■■□□□ 1.85
UFD1-204ENST00000447868 ASB16Q96NS5 453 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 GCNAQ96QF7 691 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 PLA2G2FQ9BZM2 168 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 IL21Q9HBE4 155 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 METTL14Q9HCE5 456 aaKnown RBP26.63■■□□□ 1.85
UFD1-204ENST00000447868 RAB20Q9NX57 234 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 HMGXB4Q9UGU5 601 aa26.63■■□□□ 1.85
UFD1-204ENST00000447868 SLC38A8A6NNN8 435 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 CLDN5O00501 218 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 ECI2O75521 394 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 FCARP24071 287 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 CDC25CP30307 473 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 NDST1P52848 882 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 ARHGAP15Q53QZ3 475 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 GPR158Q5T848 1215 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 FOXR2Q6PJQ5 311 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 VSTM1Q6UX27 236 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 BMP8AQ7Z5Y6 402 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 ACOT1Q86TX2 421 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 SMARCD2Q92925 531 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 SLC35C1Q96A29 364 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 TNIP3Q96KP6 325 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 B3GNT5Q9BYG0 378 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 BCO2Q9BYV7 579 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 GPR88Q9GZN0 384 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 NIF3L1Q9GZT8 377 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 ZFP14Q9HCL3 533 aa26.62■■□□□ 1.85
UFD1-204ENST00000447868 ANXA13P27216 316 aa26.61■■□□□ 1.85
UFD1-204ENST00000447868 GPIHBP1Q8IV16 184 aa26.61■■□□□ 1.85
UFD1-204ENST00000447868 ELSPBP1Q96BH3 223 aa26.61■■□□□ 1.85
UFD1-204ENST00000447868 MED10Q9BTT4 135 aa26.61■■□□□ 1.85
UFD1-204ENST00000447868 SRRTQ9BXP5 876 aaKnown RBP26.61■■□□□ 1.85
UFD1-204ENST00000447868 ZNF518BQ9C0D4 1074 aa26.61■■□□□ 1.85
UFD1-204ENST00000447868 GOLGA6L22H0YM25 854 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 NOL4O94818 638 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 CD58P19256 250 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 COL9A1P20849 921 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 VIPR2P41587 438 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 NLRP12P59046 1061 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 GPC5P78333 572 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 WDR44Q5JSH3 913 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 SIX5Q8N196 739 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 CYP3A43Q9HB55 503 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 CA14Q9ULX7 337 aa26.6■■□□□ 1.85
UFD1-204ENST00000447868 CACNA2D1P54289 1103 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 GRM2Q14416 872 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 TMEM150AQ86TG1 271 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 UNC93AQ86WB7 457 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 SUGP1Q8IWZ8 645 aaKnown RBP26.59■■□□□ 1.85
UFD1-204ENST00000447868 FBXL6Q8N531 539 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 GPT2Q8TD30 523 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 ELOVL4Q9GZR5 314 aa26.59■■□□□ 1.85
UFD1-204ENST00000447868 MFSD1Q9H3U5 465 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms