RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 A8MXQ7 604 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 PPP1R3GB7ZBB8 358 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 EPB41P11171 864 aaKnown RBP20.05■□□□□ 0.8
HDAC4-203ENST00000445704 NPR3P17342 541 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 PTPN1P18031 435 aaKnown RBP20.05■□□□□ 0.8
HDAC4-203ENST00000445704 VIPR2P41587 438 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 RPL10AP62906 217 aaKnown RBP20.05■□□□□ 0.8
HDAC4-203ENST00000445704 CYP27A1Q02318 531 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 CWF19L1Q69YN2 538 aaKnown RBP20.05■□□□□ 0.8
HDAC4-203ENST00000445704 C4orf50Q6ZRC1 276 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 TMEM150AQ86TG1 271 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 MYCBPAPQ8TBZ2 947 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 TAF4BQ92750 862 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 SMARCD2Q92925 531 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 SLITRK6Q9H5Y7 841 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 APOBEC3GQ9HC16 384 aaKnown RBP20.05■□□□□ 0.8
HDAC4-203ENST00000445704 ZFP14Q9HCL3 533 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 TMEM8AQ9HCN3 771 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 MAGEC2Q9UBF1 373 aaPredicted RBP20.05■□□□□ 0.8
HDAC4-203ENST00000445704 PTPRDP23468 1912 aa20.05■□□□□ 0.8
HDAC4-203ENST00000445704 SLC38A8A6NNN8 435 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 PSMA7O14818 248 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 SLC16A3O15427 465 aaKnown RBP20.04■□□□□ 0.8
HDAC4-203ENST00000445704 FGF19O95750 216 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 BDNFP23560 247 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 MAGEA11P43364 429 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 ASPAP45381 313 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 FKBP3Q00688 224 aaKnown RBP20.04■□□□□ 0.8
HDAC4-203ENST00000445704 GRM2Q14416 872 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 MAPRE1Q15691 268 aaKnown RBP20.04■□□□□ 0.8
HDAC4-203ENST00000445704 TAF12Q16514 161 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 GPR158Q5T848 1215 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 KLHL10Q6JEL2 608 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 VITQ6UXI7 678 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 SCN4BQ8IWT1 228 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 RSPRY1Q96DX4 576 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-203ENST00000445704 DUSP9Q99956 384 aaKnown RBP20.04■□□□□ 0.8
HDAC4-203ENST00000445704 MFSD1Q9H3U5 465 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 TRPV4Q9HBA0 871 aa20.04■□□□□ 0.8
HDAC4-203ENST00000445704 MAGED2Q9UNF1 606 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-203ENST00000445704 OBSL1O75147 1896 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 NOL4O94818 638 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 F11P03951 625 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 CSH1P0DML2 217 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 CSH2P0DML3 217 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 CDC25CP30307 473 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 AVPR2P30518 371 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 CACNA2D1P54289 1103 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 NLRP12P59046 1061 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 STIM1Q13586 685 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 CAMK4Q16566 473 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 TTI2Q6NXR4 508 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 GPIHBP1Q8IV16 184 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 TMEM105Q8N8V8 129 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 B3GALNT2Q8NCR0 500 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 FLCNQ8NFG4 579 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 SEMA4DQ92854 862 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 B3GNT5Q9BYG0 378 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 GPR88Q9GZN0 384 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 ARHGEF3Q9NR81 526 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 TMEM30AQ9NV96 361 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 HMGXB4Q9UGU5 601 aa20.03■□□□□ 0.8
HDAC4-203ENST00000445704 CLDN5O00501 218 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 TADA3O75528 432 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 GTF2H1P32780 548 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 MXI1P50539 228 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 NOP14P78316 857 aaKnown RBP20.02■□□□□ 0.8
HDAC4-203ENST00000445704 ORC1Q13415 861 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 DCAF17Q5H9S7 520 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-203ENST00000445704 KRT39Q6A163 491 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 VSTM1Q6UX27 236 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 CLEC17AQ6ZS10 378 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 NELFBQ8WX92 580 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 BCO2Q9BYV7 579 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 ZNF518BQ9C0D4 1074 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 CTNND2Q9UQB3 1225 aa20.02■□□□□ 0.8
HDAC4-203ENST00000445704 ZDBF2Q9HCK1 2354 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 NUP210Q8TEM1 1887 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-203ENST00000445704 PRAMEF12O95522 483 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 P4HA1P13674 534 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 PPP1R2P41236 205 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 CBWD6Q4V339 395 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 ARHGAP15Q53QZ3 475 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 CBWD3Q5JTY5 395 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 CBWD5Q5RIA9 395 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 TCERG1LQ5VWI1 586 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 ASTLQ6HA08 431 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-203ENST00000445704 ARID3BQ8IVW6 561 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-203ENST00000445704 TRMT2BQ96GJ1 504 aaKnown RBP20.01■□□□□ 0.79
HDAC4-203ENST00000445704 MYRFLQ96LU7 910 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 GCNAQ96QF7 691 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 SLC46A2Q9BY10 475 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 TASP1Q9H6P5 420 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 KIAA1468Q9P260 1216 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 COL4A2P08572 1712 aa20.01■□□□□ 0.79
HDAC4-203ENST00000445704 GREB1Q4ZG55 1949 aa20■□□□□ 0.79
HDAC4-203ENST00000445704 DENND4CQ5VZ89 1909 aa20■□□□□ 0.79
HDAC4-203ENST00000445704 HEPACAM2A8MVW5 462 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms