RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CASP4P49662 377 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 EIF3BP55884 814 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GTF2BQ00403 316 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PTK2Q05397 1052 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 HYAL1Q12794 435 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 DHX34Q14147 1143 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RARS2Q5T160 578 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 PTCRAQ6ISU1 281 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 KDM7AQ6ZMT4 941 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 DPH6Q7L8W6 267 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF598Q86UK7 904 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 EXOC8Q8IYI6 725 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 C3orf58Q8NDZ4 430 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 MRPL38Q96DV4 380 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ACAP3Q96P50 834 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 ACO2Q99798 780 aaKnown RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 RAB17Q9H0T7 212 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 UBE2ZQ9H832 354 aaPredicted RBP5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GCNT4Q9P109 453 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 APEX2Q9UBZ4 518 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 TBX20Q9UMR3 447 aa5.06□□□□□ -1.6
EDEM3-203ENST00000439962 GOLGA6CA6NDK9 693 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 PTGESO14684 152 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 TBX10O75333 385 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 SOAT2O75908 522 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GOLGA6DP0CG33 693 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 NCKAP1LP55160 1127 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 C2orf54Q08AI8 447 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 BFSP1Q12934 665 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 AGBL2Q5U5Z8 902 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF571Q7Z3V5 609 aaPredicted RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 IQCKQ8N0W5 287 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GSTCDQ8NEC7 633 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 KNL1Q8NG31 2342 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 TMC2Q8TDI7 906 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GPR152Q8TDT2 470 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ADAMTS19Q8TE59 1207 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 SPIRE2Q8WWL2 714 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 IGSF21Q96ID5 467 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 LRRC1Q9BTT6 524 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 C2orf40Q9H1Z8 148 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 FZD8Q9H461 694 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 FAM204AQ9H8W3 233 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 KIAA1586Q9HCI6 787 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 NLRC4Q9NPP4 1024 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 AGPAT3Q9NRZ7 376 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GOLGA6AQ9NYA3 693 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 AMFRQ9UKV5 643 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 COQ4Q9Y3A0 265 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 HCFC2Q9Y5Z7 792 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 DUSP10Q9Y6W6 482 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ATG2BQ96BY7 2078 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GOLGA6L10A0A0M3HER8 536 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 SMIM28A0A1B0GU29 152 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 LACTBL1A8MY62 500 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 AGPSO00116 658 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ADAM12O43184 909 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GAS2O43903 313 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 SRGAP2O75044 1071 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 EOMESO95936 686 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ASGR2P07307 311 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 NFICP08651 508 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CNPP09543 421 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 LAG3P18627 525 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 LMAN1P49257 510 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 HNRNPH2P55795 449 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 WNT7BP56706 349 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CDC42EP1Q00587 391 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 MYL7Q01449 175 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 IFRD2Q12894 506 aaPredicted RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CCDC142Q17RM4 750 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 RTP2Q5QGT7 225 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CMTR2Q8IYT2 770 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 HACE1Q8IYU2 909 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CRIPAKQ8N1N5 446 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 MAIP1Q8WWC4 291 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CTNNBL1Q8WYA6 563 aaPredicted RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 KHSRPQ92945 711 aaKnown RBP eCLIP5.05□□□□□ -1.64e-6■■□□□ 13.7
EDEM3-203ENST00000439962 CAPZA3Q96KX2 299 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 UHRF1Q96T88 793 aaPredicted RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 NTPCRQ9BSD7 190 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 VN1R3Q9BXE9 311 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 NSUN3Q9H649 340 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 RC3H2Q9HBD1 1191 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CD320Q9NPF0 282 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 CHST12Q9NRB3 414 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ST7Q9NRC1 585 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 RBM12Q9NTZ6 932 aaKnown RBP5.05□□□□□ -1.6
EDEM3-203ENST00000439962 ARHGAP28Q9P2N2 729 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 SALL4Q9UJQ4 1053 aa5.05□□□□□ -1.6
EDEM3-203ENST00000439962 GPR179Q6PRD1 2367 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CNTNAP2Q9UHC6 1331 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 STK25O00506 426 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 NDC80O14777 642 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF185O15231 689 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 HCRTO43612 131 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 HEXIM1O94992 359 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 URODP06132 367 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TKTP29401 623 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 MAN1A1P33908 653 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms