RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 VCAM1P19320 739 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 TXNRD3Q86VQ6 643 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 SLC25A41Q8N5S1 370 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 FBXO32Q969P5 355 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 PPP1R36Q96LQ0 422 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 RUSC1Q9BVN2 902 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 GOLGA8RI6L899 631 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 PJA2O43164 708 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 GEMP55040 296 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 NCKAP1LP55160 1127 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 GEMIN4P57678 1058 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 CCNJLQ8IV13 435 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 USP27XA6NNY8 438 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MAN1A2O60476 641 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 SOAT2O75908 522 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 ENO1P06733 434 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 THP07101 528 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 TP53BP2Q13625 1128 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MTF1Q14872 753 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 NBPF20Q3BBV1 942 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 WDR49Q8IV35 697 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 C17orf80Q9BSJ5 609 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 AGO4Q9HCK5 861 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 KANSL3Q9P2N6 904 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 SLC37A4O43826 429 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 SRP72O76094 671 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 URODP06132 367 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 VDRP11473 427 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 STIP1P31948 543 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 UNC45BQ8IWX7 931 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 C2CD2LO14523 706 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 SMAD1Q15797 465 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 AGAP9Q5VTM2 703 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 PI4K2AQ9BTU6 479 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 ADGRA2Q96PE1 1338 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MAPTP10636 758 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 TRMT6Q9UJA5 497 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 KRT8P05787 483 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MDH1P40925 334 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 EPHB3P54753 998 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 FAM117BQ6P1L5 589 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 FAM162AQ96A26 154 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 CHN1P15882 459 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 HLA-DPA1P20036 260 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MAGEA4P43358 317 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 ILF2Q12905 390 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 ZNF507Q8TCN5 953 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 CGRRF1Q99675 332 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 TRAF3IP3Q9Y228 551 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 TMX2Q9Y320 296 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MYH6P13533 1939 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 SYNDIG1LA6NDD5 238 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 ANXA11P50995 505 aaKnown RBP16.49■□□□□ 0.23
PTPN13-204ENST00000436978 TPCN2Q8NHX9 752 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 MTMR12Q9C0I1 747 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 TMEM161AQ9NX61 479 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 SPACA6W5XKT8 324 aa16.49■□□□□ 0.23
PTPN13-204ENST00000436978 C3P01024 1663 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 CYB561D2O14569 222 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 CST8O60676 142 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 DMC1Q14565 340 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 JAMLQ86YT9 394 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 FAR2Q96K12 515 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 UBXN6Q9BZV1 441 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 IL1R1P14778 569 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 OAZ1P54368 228 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 LONRF1Q17RB8 773 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 TRIM65Q6PJ69 517 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 MRPS31Q92665 395 aaKnown RBP16.48■□□□□ 0.23
PTPN13-204ENST00000436978 OTULINQ96BN8 352 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 KCNK16Q96T55 309 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
PTPN13-204ENST00000436978 SMARCAL1Q9NZC9 954 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 MPP6Q9NZW5 540 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 BLOC1S6Q9UL45 172 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 ZMYM2Q9UBW7 1377 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 AMPD2Q01433 879 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 GYPCP04921 128 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 GYS1P13807 737 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 SLC9A1P19634 815 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 POU4F1Q01851 419 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 SLFN11Q7Z7L1 901 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 TRIM51Q9BSJ1 452 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
PTPN13-204ENST00000436978 M0QYT0 321 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 PON1P27169 355 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 SEPT8Q92599 483 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 CYP3A43Q9HB55 503 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms