RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SPACA1Q9HBV2 294 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 IARS2Q9NSE4 1012 aaKnown RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 VAV3Q9UKW4 847 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 PCOLCE2Q9UKZ9 415 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 ARL2BPQ9Y2Y0 163 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 FAM32AQ9Y421 112 aaKnown RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 SESN1Q9Y6P5 492 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 RAB3GAP2Q9H2M9 1393 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 FAM47E-STBD1D6RA91 191 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 DDX39AO00148 427 aaKnown RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 OPHN1O60890 802 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 PEX11AO75192 247 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 CIB2O75838 187 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 RASSF9O75901 435 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 ADAMTS2O95450 1211 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 OLFM2O95897 454 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 PENKP01210 267 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 UBTFL1P0CB47 393 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 IFI30P13284 250 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 ETS2P15036 469 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 PTBP1P26599 531 aaKnown RBP eCLIP5.6□□□□□ -1.518e-17■■■■■ 45.4
PTPN4-203ENST00000430976 HSPA13P48723 471 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 TUBP50607 506 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 GNAI1P63096 354 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 MAPRE2Q15555 327 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 MYLK3Q32MK0 819 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 PSRC1Q6PGN9 363 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 CACNA2D4Q7Z3S7 1137 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 RHOT2Q8IXI1 618 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 KRT78Q8N1N4 520 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 RASSF5Q8WWW0 418 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 RIN2Q8WYP3 895 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 ZNF669Q96BR6 464 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 SECISBP2Q96T21 854 aaKnown RBP5.6□□□□□ -1.51
PTPN4-203ENST00000430976 SLC29A1Q99808 456 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 CITED1Q99966 193 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 HINFPQ9BQA5 517 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 PRKD2Q9BZL6 878 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 SMARCAD1Q9H4L7 1026 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 EPS8L2Q9H6S3 715 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 NOD2Q9HC29 1040 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 TBC1D29Q9UFV1 150 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 MAD2L2Q9UI95 211 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 TLL2Q9Y6L7 1015 aa5.6□□□□□ -1.51
PTPN4-203ENST00000430976 A0A1B0GVL5 298 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 FAM86C2PA6NEL3 165 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PITPNM1O00562 1244 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 MBP02144 154 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 FHP07954 510 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 TFEBP19484 476 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GNG10P50151 68 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 KCNJ2P63252 427 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ATP11AP98196 1134 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 MRPL58Q14197 206 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CAPRIN1Q14444 709 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 STXBP2Q15833 593 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PDCD4Q53EL6 469 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 HGSNATQ68CP4 663 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CCDC102BQ68D86 513 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 Q6ZUG5 572 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GPR149Q86SP6 731 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CDR2LQ86X02 465 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 AKR7LQ8NHP1 331 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PSPC1Q8WXF1 523 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ZUFSPQ96AP4 578 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 VPS33AQ96AX1 596 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 AIDAQ96BJ3 306 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 LENG1Q96BZ8 264 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 SIPA1Q96FS4 1042 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 UBXN10Q96LJ8 280 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 APOL2Q9BQE5 337 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 WACQ9BTA9 647 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ZNF717Q9BY31 904 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CD93Q9NPY3 652 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 REV1Q9UBZ9 1251 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 LIMD1Q9UGP4 676 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GTF2IRD1Q9UHL9 959 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 DCTN4Q9UJW0 460 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ANAPC5Q9UJX4 755 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CHURC1-FNTBB4DL54 471 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PER1O15534 1290 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 SRGAP2O75044 1071 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ABCB1P08183 1280 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PPM1AP35813 382 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CAP2P40123 477 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 RPL35P42766 123 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ABCG1P45844 678 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 STX1AQ16623 288 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 QPCTQ16769 361 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ARHGEF16Q5VV41 709 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 SLC6A19Q695T7 634 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 TTC23LQ6PF05 361 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 TMC7Q7Z402 723 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CNBD1Q8NA66 436 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ATG16L2Q8NAA4 619 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PPP1R35Q8TAP8 253 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms