RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ECHS1P30084 290 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 SH3BGRP55822 239 aaPredicted RBP16.76■□□□□ 0.27
PKP4-205ENST00000426248 MAP2K5Q13163 448 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 TAF1BQ53T94 588 aaPredicted RBP16.76■□□□□ 0.27
PKP4-205ENST00000426248 SCARA5Q6ZMJ2 495 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 SAPCD2Q86UD0 394 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 RAB3IL1Q8TBN0 382 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 SYNCQ9H7C4 482 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 TRAF3IP3Q9Y228 551 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 ASB3Q9Y575 518 aa16.76■□□□□ 0.27
PKP4-205ENST00000426248 A6NJR5 290 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 ANKRD63C9JTQ0 380 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 TNNC2P02585 160 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 CRHR2Q13324 411 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 MORC4Q8TE76 937 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 FAM84AQ96KN4 292 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 RUNDC3BQ96NL0 473 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 NPHS2Q9NP85 383 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 PARP2Q9UGN5 583 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 SMAPO00193 183 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 FIGNQ5HY92 759 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 EXOC3L1Q86VI1 746 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 GPR20Q99678 358 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 INTS2Q9H0H0 1204 aaKnown RBP16.75■□□□□ 0.27
PKP4-205ENST00000426248 KCTD10Q9H3F6 313 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 TGFB1I1O43294 461 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 CYP2C9P11712 490 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 GALK1P51570 392 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 EFNA5P52803 228 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
PKP4-205ENST00000426248 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 OLFML1Q6UWY5 402 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 EPM2AIP1Q7L775 607 aaPredicted RBP16.75■□□□□ 0.27
PKP4-205ENST00000426248 TLK2Q86UE8 772 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 ZNF653Q96CK0 615 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 C18orf8Q96DM3 657 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 MAML3Q96JK9 1138 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
PKP4-205ENST00000426248 TMCO1Q9UM00 188 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 ASTN1O14525 1302 aa16.75■□□□□ 0.27
PKP4-205ENST00000426248 UCHL3P15374 230 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 PTK2Q05397 1052 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 ACTRT1Q8TDG2 376 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 MS4A4AQ96JQ5 239 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 PTPN18Q99952 460 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 RPF1Q9H9Y2 349 aaKnown RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 C17orf75Q9HAS0 396 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 TOPORSQ9NS56 1045 aaPredicted RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 FER1L6Q2WGJ9 1857 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 SLC15A5A6NIM6 579 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 ESRRAP11474 423 aaPredicted RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 KCNJ1P48048 391 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 CCL14Q16627 93 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 DAW1Q8N136 415 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 A0A087WZ62 844 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 AOC2O75106 756 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 YY1P25490 414 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 AUHQ13825 339 aaKnown RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 RFWD3Q6PCD5 774 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 FDXACB1Q9BRP7 624 aaPredicted RBP16.74■□□□□ 0.27
PKP4-205ENST00000426248 C2orf40Q9H1Z8 148 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
PKP4-205ENST00000426248 ARHGAP42A6NI28 874 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 CNMDO75829 334 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 FUT4P22083 530 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 ADARP55265 1226 aaKnown RBP16.73■□□□□ 0.27
PKP4-205ENST00000426248 KRT39Q6A163 491 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 PIP4K2CQ8TBX8 421 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 ZNF333Q96JL9 665 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 MTUS1Q9ULD2 1270 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 SIK3Q9Y2K2 1263 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 NR2E1Q9Y466 385 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 PGK1P00558 417 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 TROVE2P10155 538 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■□□□□ 8.1
PKP4-205ENST00000426248 CA4P22748 312 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 GLRA2P23416 452 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 NAMPTP43490 491 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 IFNL1Q8IU54 200 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 SSC5DA1L4H1 1573 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 LDHAP00338 332 aaKnown RBP16.73■□□□□ 0.27
PKP4-205ENST00000426248 FLT3LGP49771 235 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 MFAP3P55082 362 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 RTP1P59025 263 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 PPP1R21Q6ZMI0 780 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 RASSF3Q86WH2 238 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 TMEM161BQ8NDZ6 487 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 ARHGEF38Q9NXL2 777 aa16.73■□□□□ 0.27
PKP4-205ENST00000426248 TDRKHQ9Y2W6 561 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms