RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 C1orf228Q6PIY5 440 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 ADGRF2Q8IZF7 708 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 TMEM86AQ8N2M4 240 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 RDH13Q8NBN7 331 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 TTC16Q8NEE8 873 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 SECISBP2LQ93073 1101 aaKnown RBP16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 DHX58Q96C10 678 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 CHFRQ96EP1 664 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 SLC22A12Q96S37 553 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 USP18Q9UMW8 372 aa16.74■□□□□ 0.27
RHBDF1-202ENST00000417043 GREB1Q4ZG55 1949 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 GABRDO14764 452 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 PSMC1P62191 440 aaKnown RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 SPEM2Q0P670 501 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 RUNX3Q13761 415 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 NAIF1Q69YI7 327 aaPredicted RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 SHC4Q6S5L8 630 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 MON1AQ86VX9 555 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 SPATA2LQ8IUW3 424 aaPredicted RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 SCN4BQ8IWT1 228 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 TOP6BLQ8N6T0 577 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 LEO1Q8WVC0 666 aaPredicted RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 MRPS31Q92665 395 aaKnown RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 HPDLQ96IR7 371 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 ANKRD36BP1Q96IX9 119 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 FBRSL1Q9HCM7 1045 aaKnown RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 TRPC7Q9HCX4 862 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 POLR3BQ9NW08 1133 aaPredicted RBP16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 GMEB2Q9UKD1 530 aa16.73■□□□□ 0.27
RHBDF1-202ENST00000417043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 ZNF233A6NK53 670 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 CLIC2O15247 247 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 PDGFRBP09619 1106 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 LHX1P48742 406 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 PXNP49023 591 aaPredicted RBP16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 ASIC1P78348 528 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 SIM2Q14190 667 aaPredicted RBP16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 FSTL4Q6MZW2 842 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 KBTBD7Q8WVZ9 684 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 TNMDQ9H2S6 317 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 ABCB6Q9NP58 842 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 RAB23Q9ULC3 237 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 NCOR2Q9Y618 2525 aa16.72■□□□□ 0.27
RHBDF1-202ENST00000417043 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 PPP6R2O75170 966 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 NOL4O94818 638 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 DDX6P26196 483 aaKnown RBP eCLIP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 ATXN1P54253 815 aaKnown RBP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 MYO1EQ12965 1108 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 FAM171BQ6P995 826 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 EPM2AIP1Q7L775 607 aaPredicted RBP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 LONP2Q86WA8 852 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 GPR161Q8N6U8 529 aaKnown RBP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 ZNF396Q96N95 335 aaPredicted RBP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 SYT15Q9BQS2 421 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 CRTAC1Q9NQ79 661 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.27
RHBDF1-202ENST00000417043 C2orf78A6NCI8 922 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 CUTAO60888 179 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 PAPSS2O95340 614 aaPredicted RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 EGFP01133 1207 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 TNNC2P02585 160 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 DLATP10515 647 aaKnown RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 BDNFP23560 247 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 PCSK1P29120 753 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 DUOXA2Q1HG44 320 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 TMEM196Q5HYL7 178 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 LAIR1Q6GTX8 287 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 CC2D1AQ6P1N0 951 aaPredicted RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 TRAPPC11Q7Z392 1133 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 LIMS2Q7Z4I7 341 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 MYLPFQ96A32 169 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 CCDC127Q96BQ5 260 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 TRMT2BQ96GJ1 504 aaKnown RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 MRPL45Q9BRJ2 306 aaKnown RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 UXTQ9UBK9 157 aaPredicted RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 NME7Q9Y5B8 376 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 PTPRDP23468 1912 aa16.7■□□□□ 0.26
RHBDF1-202ENST00000417043 POLR2DO15514 142 aaKnown RBP16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 GALK1P51570 392 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 CYP2J2P51589 502 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 USP46P62068 366 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms