RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 FTLP02792 175 aaPredicted RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 CPB1P15086 417 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 PPM1AP35813 382 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 RGS7P49802 495 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 TSPY1Q01534 308 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 PAQR9Q6ZVX9 377 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 TDHQ8IZJ6 230 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 MYLPFQ96A32 169 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 LZTFL1Q9NQ48 299 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 CHST7Q9NS84 486 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 TMEM30AQ9NV96 361 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 ABI2Q9NYB9 513 aaPredicted RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 PCDHA13Q9Y5I0 950 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 EIF3CLB5ME19 914 aaKnown RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 MED7O43513 233 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 BDNFP23560 247 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 DNAJB1P25685 340 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 CNGA2Q16280 664 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 PSMD5Q16401 504 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 HS1BP3Q53T59 392 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 ZNF280DQ6N043 979 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 ATAD1Q8NBU5 361 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 EIF3CQ99613 913 aaKnown RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 NKX2-4Q9H2Z4 354 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 PAX3P23760 479 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 OR1D2P34982 312 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 MAGEA1P43355 309 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 ERVFC1P60507 584 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 TAP1Q03518 808 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.27
PMS1-204ENST00000409823 CLEC16AQ2KHT3 1053 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 TMC7Q7Z402 723 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 ZNF677Q86XU0 584 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.27
PMS1-204ENST00000409823 TTC9BQ8N6N2 239 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 LACRTQ9GZZ8 138 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 KRT82Q9NSB4 513 aa13.33□□□□□ -0.27
PMS1-204ENST00000409823 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.28
PMS1-204ENST00000409823 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.28
PMS1-204ENST00000409823 SOAT2O75908 522 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 CCDC175P0C221 793 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.28
PMS1-204ENST00000409823 CYP2F1P24903 491 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 GLUD2P49448 558 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 MAP3K7CLP57077 242 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 NOMO3P69849 1222 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 PDE4CQ08493 712 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 CYP4A22Q5TCH4 519 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 LCLAT1Q6UWP7 414 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 ANKS3Q6ZW76 656 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 KIAA1328Q86T90 577 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 ARNTL2Q8WYA1 636 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 FAM124BQ9H5Z6 455 aaPredicted RBP13.33□□□□□ -0.28
PMS1-204ENST00000409823 HESX1Q9UBX0 185 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 KIAA1257Q9ULG3 409 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 TSC2P49815 1807 aa13.33□□□□□ -0.28
PMS1-204ENST00000409823 URODP06132 367 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 GPD2P43304 727 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 RGS19P49795 217 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 PMF1Q6P1K2 205 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 FAM171BQ6P995 826 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 RNF19BQ6ZMZ0 732 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 KIAA1524Q8TCG1 905 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 MICAL1Q8TDZ2 1067 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 POF1BQ8WVV4 589 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 PKMYT1Q99640 499 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 TCF25Q9BQ70 676 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 THAP2Q9H0W7 228 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 PCDHGC3Q9UN70 934 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 PCDHA11Q9Y5I1 949 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 KIAA1671Q9BY89 1806 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 GRM6O15303 877 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 AP1G2O75843 785 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 CYP1A1P04798 512 aaPredicted RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 GALCP54803 685 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 SDHAF4Q5VUM1 108 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 CPXM1Q96SM3 734 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 ENTPD7Q9NQZ7 604 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 MRPL17Q9NRX2 175 aaKnown RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 CEP83Q9Y592 693 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms