RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 NRCAMQ92823 1304 aa20.89■□□□□ 0.93
LIMS2-207ENST00000409808 TMEM120BA0PK00 339 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 ARF4P18085 180 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-207ENST00000409808 ADCY8P40145 1251 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 IFNAR2P48551 515 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 ELF3P78545 371 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-207ENST00000409808 RIPK1Q13546 671 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 IFNLR1Q8IU57 520 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-207ENST00000409808 RHOT1Q8IXI2 618 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 CKAP2Q8WWK9 683 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 MRPL47Q9HD33 250 aaKnown RBP20.88■□□□□ 0.93
LIMS2-207ENST00000409808 RNF186Q9NXI6 227 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 HAS3O00219 553 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 O00370 1275 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 TREHO43280 583 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 THAP12O43422 761 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 PGK1P00558 417 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 CALCAP01258 141 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 CYP2C9P11712 490 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 LMNB2Q03252 620 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 STAT4Q14765 748 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 MFSD14CQ5VZR4 134 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-207ENST00000409808 PDZD7Q9H5P4 517 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 Q9Y3F1 56 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 NEU2Q9Y3R4 380 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 ANK1P16157 1881 aa20.88■□□□□ 0.93
LIMS2-207ENST00000409808 TRPA1O75762 1119 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 ELNP15502 786 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 RRM1P23921 792 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 CHKAP35790 457 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 FAM187BQ17R55 369 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 CCDC38Q502W7 563 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 VSTM1Q6UX27 236 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 DNAJB3Q8WWF6 145 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 MTMR12Q9C0I1 747 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 CST3P01034 146 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-207ENST00000409808 CXCL8P10145 99 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 CETN2P41208 172 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 PURAQ00577 322 aaKnown RBP20.87■□□□□ 0.93
LIMS2-207ENST00000409808 SP3Q02447 781 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 KLF1Q13351 362 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-207ENST00000409808 ZNF365Q70YC5 407 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 KATNAL2Q8IYT4 538 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 RIBC1Q8N443 379 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-207ENST00000409808 CCHCR1Q8TD31 782 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 ADAMTS10Q9H324 1103 aa20.87■□□□□ 0.93
LIMS2-207ENST00000409808 APOBEC3GQ9HC16 384 aaKnown RBP20.87■□□□□ 0.93
LIMS2-207ENST00000409808 TSPAN1O60635 241 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 CDH16O75309 829 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 DUSP11O75319 330 aaKnown RBP20.86■□□□□ 0.93
LIMS2-207ENST00000409808 CACNB2Q08289 660 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-207ENST00000409808 GNASQ5JWF2 1037 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 ARHGEF18Q6ZSZ5 1173 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 MON1BQ7L1V2 547 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 NINJ2Q9NZG7 142 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 MBLAC1A4D2B0 266 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-207ENST00000409808 TCP11X1B4DZS4 312 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 GPR32O75388 356 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 EZRP15311 586 aaKnown RBP20.86■□□□□ 0.93
LIMS2-207ENST00000409808 ADAM17P78536 824 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 KYNUQ16719 465 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 HIBCHQ6NVY1 386 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-207ENST00000409808 EXD1Q8NHP7 514 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 OSMRQ99650 979 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 SCINQ9Y6U3 715 aa20.86■□□□□ 0.93
LIMS2-207ENST00000409808 UMODL1Q5DID0 1318 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 ABHD2P08910 425 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 HTRA3P83110 453 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 TFAMQ00059 246 aaKnown RBP20.85■□□□□ 0.93
LIMS2-207ENST00000409808 PPP1R21Q6ZMI0 780 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 FAM228AQ86W67 206 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 CPA5Q8WXQ8 436 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 ATG4AQ8WYN0 398 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 GRAMD1AQ96CP6 724 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 KCNK9Q9NPC2 374 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 ARL2BPQ9Y2Y0 163 aa20.85■□□□□ 0.93
LIMS2-207ENST00000409808 MYCNP04198 464 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-207ENST00000409808 STAG3L1P0CL83 205 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 BRAFP15056 766 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 CCND3P30281 292 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-207ENST00000409808 NR1H3Q13133 447 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 NCOA4Q13772 614 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 GALNTL6Q49A17 601 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 CXCL17Q6UXB2 119 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 WDR49Q8IV35 697 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 CREBZFQ9NS37 354 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 CEP350Q5VT06 3117 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 GJB6O95452 261 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 ATP6V1G2O95670 118 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 RALAP11233 206 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 ZNF410Q86VK4 478 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 PHF13Q86YI8 300 aaPredicted RBP20.84■□□□□ 0.93
LIMS2-207ENST00000409808 MAGEB18Q96M61 343 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 NKIRAS1Q9NYS0 192 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 NUB1Q9Y5A7 615 aa20.84■□□□□ 0.93
LIMS2-207ENST00000409808 A0A1B0GUA9 196 aa20.83■□□□□ 0.93
LIMS2-207ENST00000409808 SMIM35A0A1B0GVV1 85 aa20.83■□□□□ 0.93
LIMS2-207ENST00000409808 NDC80O14777 642 aa20.83■□□□□ 0.93
LIMS2-207ENST00000409808 CD99L2Q8TCZ2 262 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms