RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NID2Q14112 1375 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 SLC12A8A0AV02 714 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 KIF3CO14782 793 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 P4HA2O15460 535 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 OPA1O60313 960 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 KIAA0754O94854 1291 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 BIRC2Q13490 618 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 CCDC62Q6P9F0 684 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 RPRD1AQ96P16 312 aaPredicted RBP11.97□□□□□ -0.49
SNX13-202ENST00000409604 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
SNX13-202ENST00000409604 RBM12Q9NTZ6 932 aaKnown RBP11.97□□□□□ -0.49
SNX13-202ENST00000409604 KCNN4O15554 427 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 APRTP07741 180 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 VDRP11473 427 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 SELPP16109 830 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 GBP1P32455 592 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 MAP2K2P36507 400 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 ZNF280DQ6N043 979 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 PBKQ96KB5 322 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 CFAP57Q96MR6 1250 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 KREMEN1Q96MU8 473 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 C16orf70Q9BSU1 422 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 UBP1Q9NZI7 540 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 F5P12259 2224 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 E2F8A0AVK6 867 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 WDR91A4D1P6 747 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 ZBTB24O43167 697 aaPredicted RBP11.96□□□□□ -0.49
SNX13-202ENST00000409604 SKIP12755 728 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 EIF3EP60228 445 aaKnown RBP11.96□□□□□ -0.49
SNX13-202ENST00000409604 SNRPFP62306 86 aaKnown RBP11.96□□□□□ -0.49
SNX13-202ENST00000409604 ANKMY2Q8IV38 441 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 EFCAB13Q8IY85 973 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 ULBP1Q9BZM6 244 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.49
SNX13-202ENST00000409604 SART1O43290 800 aaKnown RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 KRT7P08729 469 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 GPD1P21695 349 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 SLC12A2P55011 1212 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 RPL7AP62424 266 aaKnown RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 HEATR6Q6AI08 1181 aaKnown RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 TMEM199Q8N511 208 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 EPS8L1Q8TE68 723 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 OSBPL8Q9BZF1 889 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 AGO3Q9H9G7 860 aaKnown RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 SAYSD1Q9NPB0 183 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 SNX12Q9UMY4 172 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 VIRMAQ69YN4 1812 aaKnown RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 NDC80O14777 642 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 RGS16O15492 202 aaPredicted RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 PLD1Q13393 1074 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 PLPP4Q5VZY2 271 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 WDR59Q6PJI9 974 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.5
SNX13-202ENST00000409604 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 GRK7Q8WTQ7 553 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 WDCPQ9H6R7 721 aa11.96□□□□□ -0.5
SNX13-202ENST00000409604 EDIL3O43854 480 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 CPP00450 1065 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 AMHP03971 560 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 MBL2P11226 248 aaPredicted RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 LMO2P25791 158 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 NOVP48745 357 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 PDE1BQ01064 536 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 ZBTB16Q05516 673 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 DUSP4Q13115 394 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 CCDC91Q7Z6B0 441 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 RNF10Q8N5U6 811 aaKnown RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 SPATA18Q8TC71 538 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 RBM41Q96IZ5 413 aaKnown RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 SP110Q9HB58 689 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 NR2E3Q9Y5X4 410 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 USP54Q70EL1 1684 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 RBP3P10745 1247 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 ARSEP51690 589 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 PPP1R26Q5T8A7 1209 aaPredicted RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 FBXO38Q6PIJ6 1188 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 FAM228AQ86W67 206 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 MYLK4Q86YV6 388 aaPredicted RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 TPCN2Q8NHX9 752 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 TTC8Q8TAM2 541 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 C9orf72Q96LT7 481 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 ATXN3LQ9H3M9 355 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 DPEP3Q9H4B8 488 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 A0A1W2PQ45 241 aaPredicted RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 A0A1W2PQY0 241 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 MIF4GDA9UHW6 222 aaKnown RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
SNX13-202ENST00000409604 TFDP2Q14188 446 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 NFIL3Q16649 462 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 PIGZQ86VD9 579 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 DEFB106AQ8N104 65 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 RHOBTB2Q9BYZ6 727 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms