RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PIWIL1Q96J94 861 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 SHOC2Q9UQ13 582 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 C19orf81C9J6K1 198 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 EDF1O60869 148 aaKnown RBP10.36□□□□□ -0.75
MSH2-202ENST00000406134 TOM1L1O75674 476 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 TJP3O95049 919 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 LAMTOR4Q0VGL1 99 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
MSH2-202ENST00000406134 ORC1Q13415 861 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 E2F5Q15329 346 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 GNPTABQ3T906 1256 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 EEF1DP3Q658K8 133 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 UNC45BQ8IWX7 931 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 MAF1Q9H063 256 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 PIM2Q9P1W9 311 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 EXOC1LA0A1B0GW35 172 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 LGR5O75473 907 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 SUN1O94901 812 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 ENDOD1O94919 500 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 CALB1P05937 261 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 RXRBP28702 533 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 SSTR1P30872 391 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 TCF7P36402 384 aaPredicted RBP10.36□□□□□ -0.75
MSH2-202ENST00000406134 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
MSH2-202ENST00000406134 OTUD4Q01804 1114 aaKnown RBP10.36□□□□□ -0.75
MSH2-202ENST00000406134 HSDL1Q3SXM5 330 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 SH3PXD2AQ5TCZ1 1133 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 CES4AQ5XG92 561 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 SCARA5Q6ZMJ2 495 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 FAM47EQ6ZV65 393 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 ZBED8Q8IZ13 594 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 SLC7A3Q8WY07 619 aa10.36□□□□□ -0.75
MSH2-202ENST00000406134 UNC5CO95185 931 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 STX2P32856 288 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 RPL22P35268 128 aaKnown RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 CBLBQ13191 982 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 TFDP1Q14186 410 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 DNAJC24Q6P3W2 148 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 ARHGEF18Q6ZSZ5 1173 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 LRRC71Q8N4P6 559 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 SLC4A11Q8NBS3 891 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 ACTL9Q8TC94 416 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 PTPRN2Q92932 1015 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 GPR20Q99678 358 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 IMPG2Q9BZV3 1241 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 TRABDQ9H4I3 376 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 AS3MTQ9HBK9 375 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 PHTF1Q9UMS5 762 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 NME7Q9Y5B8 376 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 CEP350Q5VT06 3117 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 SIGLEC16A6NMB1 481 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 GOLGA8SH3BPF8 625 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 GOLGA8MH3BSY2 632 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 KDELR1P24390 212 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 SKIV2L2P42285 1042 aaKnown RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 CDH8P55286 799 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 PIGHQ14442 188 aaPredicted RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 ZC3H12AQ5D1E8 599 aaKnown RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 ADGRD1Q6QNK2 874 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 CAPN12Q6ZSI9 719 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 CDR2LQ86X02 465 aaPredicted RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 EMC1Q8N766 993 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 TRAPPC12Q8WVT3 735 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 THOC1Q96FV9 657 aaKnown RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 ZNF570Q96NI8 536 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 PHACTR1Q9C0D0 580 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 ZNF518BQ9C0D4 1074 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 LHX5Q9H2C1 402 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 ZNF148Q9UQR1 794 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 OGTO15294 1046 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 B4GALT4O60513 344 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 USP2O75604 605 aaPredicted RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 PFKMP08237 780 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 GABRB2P47870 512 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 CTCFP49711 727 aaPredicted RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 MTM1Q13496 603 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 POTEAQ6S8J7 498 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 BBS12Q6ZW61 710 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 GSTA5Q7RTV2 222 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 OTOAQ7RTW8 1153 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 C1orf127Q8N9H9 656 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 DYDC1Q8WWB3 177 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 CFAP57Q96MR6 1250 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 ELOVL4Q9GZR5 314 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 ASCC2Q9H1I8 757 aaPredicted RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 FZD8Q9H461 694 aa10.35□□□□□ -0.75
MSH2-202ENST00000406134 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
MSH2-202ENST00000406134 STAT5BP51692 787 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 MBTD1Q05BQ5 628 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 PDIA2Q13087 525 aaKnown RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 AMHR2Q16671 573 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 CCDC91Q7Z6B0 441 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 CMASQ8NFW8 434 aaPredicted RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 FNIP1Q8TF40 1166 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 TBC1D31Q96DN5 1066 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 TMEM237Q96Q45 408 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 MYCBPQ99417 103 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms