RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CHAMP1Q96JM3 812 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 PKMYT1Q99640 499 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 FGFBP2Q9BYJ0 223 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 KIF9Q9HAQ2 790 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 TRPC7Q9HCX4 862 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 DDX43Q9NXZ2 648 aaKnown RBP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 ADAMTS9Q9P2N4 1935 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 PLXND1Q9Y4D7 1925 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CCDC163A0A0D9SF12 145 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 ANTXRLA6NF34 631 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 FOXD2O60548 495 aaPredicted RBP12.82□□□□□ -0.36
LINC00544-201ENST00000400540 ATG13O75143 517 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 NOL4O94818 638 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 IL18RAPO95256 599 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CSH1P0DML2 217 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CSH2P0DML3 217 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 ABCD1P33897 745 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 DDIT3P35638 169 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 MPLP40238 635 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CASP5P51878 434 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 USP4Q13107 963 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 ZNF77Q15935 545 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 PLK5Q496M5 336 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 INTS6LQ5JSJ4 861 aaKnown RBP12.82□□□□□ -0.36
LINC00544-201ENST00000400540 STPG1Q5TH74 334 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CC2D1AQ6P1N0 951 aaPredicted RBP12.82□□□□□ -0.36
LINC00544-201ENST00000400540 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CXorf38Q8TB03 319 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 LEO1Q8WVC0 666 aaPredicted RBP12.82□□□□□ -0.36
LINC00544-201ENST00000400540 LOXL4Q96JB6 756 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 CYP2S1Q96SQ9 504 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 DUSP15Q9H1R2 295 aaPredicted RBP12.82□□□□□ -0.36
LINC00544-201ENST00000400540 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 GTF3C4Q9UKN8 822 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 WNT6Q9Y6F9 365 aa12.82□□□□□ -0.36
LINC00544-201ENST00000400540 GOLGA8IPA6NC78 632 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 C2orf78A6NCI8 922 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 MYMKA6NI61 221 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 GOLGA8JA6NMD2 632 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 DRD1P21728 446 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 PMLP29590 882 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 PNPLA4P41247 253 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 ZNF268Q14587 947 aaPredicted RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 PDGFRLQ15198 375 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 NFE2Q16621 373 aaPredicted RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 LARP1BQ659C4 914 aaKnown RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 OSCP1Q8WVF1 389 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 DDX1Q92499 740 aaKnown RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 HVCN1Q96D96 273 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 TRMT2BQ96GJ1 504 aaKnown RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 ZC3H10Q96K80 434 aaKnown RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 ACBD6Q9BR61 282 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 MRPL44Q9H9J2 332 aaKnown RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 RBAKQ9NYW8 714 aaPredicted RBP12.81□□□□□ -0.36
LINC00544-201ENST00000400540 SMC3Q9UQE7 1217 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
LINC00544-201ENST00000400540 HUS1O60921 280 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 AKAP3O75969 853 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 GCNT3O95395 438 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 CKMP06732 381 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 KRT19P08727 400 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 IFNAR2P48551 515 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 MYL7Q01449 175 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
LINC00544-201ENST00000400540 FAM160A1Q05DH4 1040 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 PSMD2Q13200 908 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 DMC1Q14565 340 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 EML3Q32P44 896 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
LINC00544-201ENST00000400540 LMBRD2Q68DH5 695 aaPredicted RBP12.8□□□□□ -0.36
LINC00544-201ENST00000400540 NT5DC4Q86YG4 428 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 CPA6Q8N4T0 437 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 CAMKK1Q8N5S9 505 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 ARL14EPQ8N8R7 260 aaPredicted RBP12.8□□□□□ -0.36
LINC00544-201ENST00000400540 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
LINC00544-201ENST00000400540 CD101Q93033 1021 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 CBWD1Q9BRT8 395 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 MTMR12Q9C0I1 747 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 PCIF1Q9H4Z3 704 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 SIX4Q9UIU6 781 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 INVSQ9Y283 1065 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 PCDHGA5Q9Y5G8 931 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 PTPRJQ12913 1337 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 MYH10P35580 1976 aa12.8□□□□□ -0.36
LINC00544-201ENST00000400540 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms